RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 EIF2AQ9BY44 585 aaKnown RBP9.62□□□□□ -0.87
COPB1-210ENST00000533533 PLEKHA4Q9H4M7 779 aa9.62□□□□□ -0.87
COPB1-210ENST00000533533 CHST7Q9NS84 486 aa9.62□□□□□ -0.87
COPB1-210ENST00000533533 DDX19AQ9NUU7 478 aaKnown RBP9.62□□□□□ -0.87
COPB1-210ENST00000533533 KIAA1024Q9UPX6 916 aa9.62□□□□□ -0.87
COPB1-210ENST00000533533 HES2Q9Y543 173 aa9.62□□□□□ -0.87
COPB1-210ENST00000533533 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
COPB1-210ENST00000533533 TRIP11Q15643 1979 aa9.62□□□□□ -0.87
COPB1-210ENST00000533533 F8W810 466 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 TSPAN1O60635 241 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 NR1I2O75469 434 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 SPATA31D3P0C874 917 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 SRFP11831 508 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 LAMP2P13473 410 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 RPA1P27694 616 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 UBA7P41226 1012 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 SCNN1GP51170 649 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 NCBP1Q09161 790 aaKnown RBP9.61□□□□□ -0.87
COPB1-210ENST00000533533 MXD4Q14582 209 aaPredicted RBP9.61□□□□□ -0.87
COPB1-210ENST00000533533 STK38Q15208 465 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 ARL6IP4Q66PJ3 421 aaKnown RBP9.61□□□□□ -0.87
COPB1-210ENST00000533533 SPATA31D4Q6ZUB0 917 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 PALB2Q86YC2 1186 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 GPR65Q8IYL9 337 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 IGSF22Q8N9C0 903 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 CPB2Q96IY4 423 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 ZFP42Q96MM3 310 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 USP28Q96RU2 1077 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 MTRQ99707 1265 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 POLR3CQ9BUI4 534 aaPredicted RBP9.61□□□□□ -0.87
COPB1-210ENST00000533533 COLEC11Q9BWP8 271 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 NT5C3AQ9H0P0 336 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 CSRNP2Q9H175 543 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 SEMA4AQ9H3S1 761 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 TBC1D17Q9HA65 648 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 PIDD1Q9HB75 910 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 XPNPEP1Q9NQW7 623 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.61□□□□□ -0.87
COPB1-210ENST00000533533 ANKEF1Q9NU02 776 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 MIOSQ9NXC5 875 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.61□□□□□ -0.871e-34■■■■□ 19.8
COPB1-210ENST00000533533 TFIP11Q9UBB9 837 aaKnown RBP9.61□□□□□ -0.87
COPB1-210ENST00000533533 CA14Q9ULX7 337 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 CHD8Q9HCK8 2581 aa9.61□□□□□ -0.87
COPB1-210ENST00000533533 NOTCH4Q99466 2003 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 INO80B-WBP1J3KQ70 363 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 TGM5O43548 720 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 LYPLA2O95372 231 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 F13A1P00488 732 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 LMNAP02545 664 aaKnown RBP9.6□□□□□ -0.87
COPB1-210ENST00000533533 PDIA4P13667 645 aaKnown RBP9.6□□□□□ -0.87
COPB1-210ENST00000533533 RFX1P22670 979 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 RARRES1P49788 294 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 POU5F1BQ06416 359 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 PKP1Q13835 747 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 ECM1Q16610 540 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 AMHR2Q16671 573 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 USP41Q3LFD5 358 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 FUT10Q6P4F1 479 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 LILRA6Q6PI73 481 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 IFNLR1Q8IU57 520 aaPredicted RBP9.6□□□□□ -0.87
COPB1-210ENST00000533533 GSTCDQ8NEC7 633 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 KCNG4Q8TDN1 519 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 GPR152Q8TDT2 470 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 CALML4Q96GE6 196 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 B3GALT6Q96L58 329 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 APOL6Q9BWW8 343 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 GPR62Q9BZJ7 368 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 ZDHHC7Q9NXF8 308 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 FNIP2Q9P278 1114 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 DNM3Q9UQ16 869 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 GIT1Q9Y2X7 761 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 VWA8A3KMH1 1905 aa9.6□□□□□ -0.87
COPB1-210ENST00000533533 ANHXE9PGG2 379 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 E9PMD0 336 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 DGAT1O75907 488 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 XRCC6P12956 609 aaKnown RBP eCLIP9.59□□□□□ -0.87
COPB1-210ENST00000533533 ARF4P18085 180 aaPredicted RBP9.59□□□□□ -0.87
COPB1-210ENST00000533533 AKAP5P24588 427 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 CREMQ03060 361 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 GRIN1Q05586 938 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 HTR4Q13639 388 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 CAPSQ13938 189 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 TFDP1Q14186 410 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 DHX8Q14562 1220 aaKnown RBP9.59□□□□□ -0.87
COPB1-210ENST00000533533 SPECC1Q5M775 1068 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 PHLDB3Q6NSJ2 640 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 PADI6Q6TGC4 694 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 GLYCTKQ8IVS8 523 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 HACE1Q8IYU2 909 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 ASAP3Q8TDY4 903 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 RIN2Q8WYP3 895 aaPredicted RBP9.59□□□□□ -0.87
COPB1-210ENST00000533533 NFKBIZQ9BYH8 718 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 TRIM6Q9C030 488 aaPredicted RBP9.59□□□□□ -0.87
COPB1-210ENST00000533533 POLR3FQ9H1D9 316 aaPredicted RBP9.59□□□□□ -0.87
COPB1-210ENST00000533533 BHMT2Q9H2M3 363 aa9.59□□□□□ -0.87
COPB1-210ENST00000533533 NXF3Q9H4D5 531 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms