RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DCTN4Q9UJW0 460 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 NWD1Q149M9 1564 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 ZBTB24O43167 697 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-205ENST00000533464 PHF2O75151 1096 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 COMTP21964 271 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 MAGEA9P43362 315 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 COG7P83436 770 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 ART3Q13508 389 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 KYAT1Q16773 422 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 AGBL3Q8NEM8 1001 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 ZNF560Q96MR9 790 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 TGS1Q96RS0 853 aaKnown RBP18.59■□□□□ 0.57
PHRF1-205ENST00000533464 PI4K2AQ9BTU6 479 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 ATMINO43313 823 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-205ENST00000533464 GCKP35557 465 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 AP1B1Q10567 949 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 EPC2Q52LR7 807 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 RASIP1Q5U651 963 aa18.59■□□□□ 0.57
PHRF1-205ENST00000533464 RAD51CO43502 376 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 EIF3EP60228 445 aaKnown RBP18.58■□□□□ 0.57
PHRF1-205ENST00000533464 EXT2Q93063 718 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 SENP7Q9BQF6 1050 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 TARS2Q9BW92 718 aaKnown RBP18.58■□□□□ 0.57
PHRF1-205ENST00000533464 PIN4Q9Y237 131 aaKnown RBP18.58■□□□□ 0.57
PHRF1-205ENST00000533464 CAP2P40123 477 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 EARS2Q5JPH6 523 aaKnown RBP18.58■□□□□ 0.57
PHRF1-205ENST00000533464 TRIM67Q6ZTA4 783 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.57
PHRF1-205ENST00000533464 CDKL3Q8IVW4 592 aaPredicted RBP18.58■□□□□ 0.57
PHRF1-205ENST00000533464 CEP120Q8N960 986 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 FBXO41Q8TF61 875 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 BFARQ9NZS9 450 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 IGSF9BQ9UPX0 1349 aa18.58■□□□□ 0.57
PHRF1-205ENST00000533464 A0A087X0T9 212 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 ICAM1P05362 532 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 FAM228BP0C875 321 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 PAMP19021 973 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 HIF1AQ16665 826 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 LRRC31Q6UY01 552 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 RCOR2Q8IZ40 523 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 SDCCAG3Q96C92 435 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 DNAJC7Q99615 494 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 CHORDC1Q9UHD1 332 aaPredicted RBP18.58■□□□□ 0.56
PHRF1-205ENST00000533464 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.56
PHRF1-205ENST00000533464 LCP1P13796 627 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 PDGFRAP16234 1089 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 CARSP49589 748 aaKnown RBP18.58■□□□□ 0.56
PHRF1-205ENST00000533464 NOP14P78316 857 aaKnown RBP18.58■□□□□ 0.56
PHRF1-205ENST00000533464 RBP5P82980 135 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 SMAD1Q15797 465 aaKnown RBP18.58■□□□□ 0.56
PHRF1-205ENST00000533464 OR6J1Q8NGC5 347 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 SIK2Q9H0K1 926 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 USH1CQ9Y6N9 552 aa18.58■□□□□ 0.56
PHRF1-205ENST00000533464 P4HA2O15460 535 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-205ENST00000533464 XRRA1Q6P2D8 792 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 LRRC71Q8N4P6 559 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 TNIP3Q96KP6 325 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 RIOX1Q9H6W3 641 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 SPAG7O75391 227 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 BYSLQ13895 437 aaKnown RBP18.57■□□□□ 0.56
PHRF1-205ENST00000533464 MOXD1Q6UVY6 613 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 SEMA6BQ9H3T3 888 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 IL17RBQ9NRM6 502 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 PPP1R37O75864 691 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 SREBF1P36956 1147 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 RFC5P40937 340 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 RGS7P49802 495 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 MCEEQ96PE7 176 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 TRAIPQ9BWF2 469 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 SLC13A1Q9BZW2 595 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 DCCP43146 1447 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 SLC15A2Q16348 729 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 HVCN1Q96D96 273 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 DUSP10Q9Y6W6 482 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
PHRF1-205ENST00000533464 GYG2O15488 501 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 DYNC1LI2O43237 492 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-205ENST00000533464 USP38Q8NB14 1042 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 DNAJC5Q9H3Z4 198 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 L2HGDHQ9H9P8 463 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 WDR35Q9P2L0 1181 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 NAGPAQ9UK23 515 aa18.57■□□□□ 0.56
PHRF1-205ENST00000533464 TNS2Q63HR2 1409 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 IQCA1LA6NCM1 817 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 MOCS2O96007 188 aaPredicted RBP18.56■□□□□ 0.56
PHRF1-205ENST00000533464 SNRPFP62306 86 aaKnown RBP18.56■□□□□ 0.56
PHRF1-205ENST00000533464 R3HDM1Q15032 1099 aaKnown RBP18.56■□□□□ 0.56
PHRF1-205ENST00000533464 DDX42Q86XP3 938 aaKnown RBP eCLIP18.56■□□□□ 0.56
PHRF1-205ENST00000533464 ANKMY2Q8IV38 441 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 LRRC37BQ96QE4 947 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 APOBEC2Q9Y235 224 aaKnown RBP18.56■□□□□ 0.56
PHRF1-205ENST00000533464 ARP10275 920 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 OCRLQ01968 901 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 STAT4Q14765 748 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 KITP10721 976 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 SATB1Q01826 763 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 TMEM132DQ14C87 1099 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 TAF11Q15544 211 aa18.56■□□□□ 0.56
PHRF1-205ENST00000533464 CDKAL1Q5VV42 579 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms