RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 ZNF568Q3ZCX4 644 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 PDXDC1Q6P996 788 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 TDRD5Q8NAT2 981 aaKnown RBP25.73■■□□□ 1.71
SMPD1-209ENST00000533196 RIN2Q8WYP3 895 aaPredicted RBP25.73■■□□□ 1.71
SMPD1-209ENST00000533196 KCNN1Q92952 543 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 FAM122AQ96E09 287 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 PPP1R10Q96QC0 940 aaKnown RBP25.73■■□□□ 1.71
SMPD1-209ENST00000533196 PAAF1Q9BRP4 392 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 LARSQ9P2J5 1176 aaKnown RBP25.73■■□□□ 1.71
SMPD1-209ENST00000533196 SLC16A4O15374 487 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 XKR4Q5GH76 650 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 KANK3Q6NY19 840 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 CCDC149Q6ZUS6 474 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 HFE2Q6ZVN8 426 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 RABGGTAQ92696 567 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 INTS4Q96HW7 963 aaKnown RBP25.72■■□□□ 1.71
SMPD1-209ENST00000533196 PLIN2Q99541 437 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 TTPALQ9BTX7 342 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 TARS2Q9BW92 718 aaKnown RBP25.72■■□□□ 1.71
SMPD1-209ENST00000533196 ODF2LQ9ULJ1 636 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 MUC6Q6W4X9 2439 aa25.72■■□□□ 1.71
SMPD1-209ENST00000533196 VPS37CA5D8V6 355 aaPredicted RBP25.71■■□□□ 1.71
SMPD1-209ENST00000533196 TMEM221A6NGB7 291 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 SFI1A8K8P3 1242 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 M0R296 226 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 KIF4AO95239 1232 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 SF3A1Q15459 793 aaKnown RBP25.71■■□□□ 1.71
SMPD1-209ENST00000533196 DCLRE1AQ6PJP8 1040 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 MPZL3Q6UWV2 235 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 ZBTB33Q86T24 672 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 TMEM161BQ8NDZ6 487 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 PIK3R5Q8WYR1 880 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 ACSF2Q96CM8 615 aaPredicted RBP25.71■■□□□ 1.71
SMPD1-209ENST00000533196 TCHPQ9BT92 498 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 CXCL16Q9H2A7 254 aa25.71■■□□□ 1.71
SMPD1-209ENST00000533196 SP100P23497 879 aaPredicted RBP25.7■■□□□ 1.7
SMPD1-209ENST00000533196 RTP2Q5QGT7 225 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 FAM171A1Q5VUB5 890 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 ALKAL1Q6UXT8 129 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 ZPBP2Q6X784 338 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 OTOP3Q7RTS5 596 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 UBALD2Q8IYN6 164 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 B3GALT6Q96L58 329 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 ACAP3Q96P50 834 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 SLC38A7Q9NVC3 462 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 ZDHHC7Q9NXF8 308 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 CACNG4Q9UBN1 327 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 SORCS3Q9UPU3 1222 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 VWA8A3KMH1 1905 aa25.7■■□□□ 1.7
SMPD1-209ENST00000533196 TRIOO75962 3097 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 SMIM28A0A1B0GU29 152 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 ABLIM1O14639 778 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 TGM5O43548 720 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 TOM1L1O75674 476 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 MAPTP10636 758 aaKnown RBP25.69■■□□□ 1.7
SMPD1-209ENST00000533196 RAD51AP2Q09MP3 1159 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 MTMR3Q13615 1198 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 LILRA6Q6PI73 481 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.69■■□□□ 1.7
SMPD1-209ENST00000533196 CEP120Q8N960 986 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 DDX27Q96GQ7 796 aaKnown RBP25.69■■□□□ 1.7
SMPD1-209ENST00000533196 ZDBF2Q9HCK1 2354 aa25.69■■□□□ 1.7
SMPD1-209ENST00000533196 CCDC195A0A1B0GUA6 201 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 TRAPPC3O43617 180 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 NCKAP1LP55160 1127 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 ARSHQ5FYA8 562 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 GLRA4Q5JXX5 417 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 PALB2Q86YC2 1186 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 KREMEN2Q8NCW0 462 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 LNX1Q8TBB1 728 aaPredicted RBP25.68■■□□□ 1.7
SMPD1-209ENST00000533196 HASPINQ8TF76 798 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 STAMQ92783 540 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 PBXIP1Q96AQ6 731 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 CCSER1Q9C0I3 900 aa25.68■■□□□ 1.7
SMPD1-209ENST00000533196 KCNE1P15382 129 aa25.67■■□□□ 1.7
SMPD1-209ENST00000533196 PDCD11Q14690 1871 aaKnown RBP25.67■■□□□ 1.7
SMPD1-209ENST00000533196 PSMD5Q16401 504 aa25.67■■□□□ 1.7
SMPD1-209ENST00000533196 UPP1Q16831 310 aa25.67■■□□□ 1.7
SMPD1-209ENST00000533196 RASSF8Q8NHQ8 419 aa25.67■■□□□ 1.7
SMPD1-209ENST00000533196 SNX27Q96L92 541 aa25.67■■□□□ 1.7
SMPD1-209ENST00000533196 BLOC1S4Q9NUP1 217 aa25.67■■□□□ 1.7
SMPD1-209ENST00000533196 B3GAT3O94766 335 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 SYT1P21579 422 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 FGFR3P22607 806 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 ABCD1P33897 745 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 CLCNKBP51801 687 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 NOLC1Q14978 699 aaKnown RBP eCLIP25.66■■□□□ 1.7
SMPD1-209ENST00000533196 PRSS55Q6UWB4 352 aaPredicted RBP25.66■■□□□ 1.7
SMPD1-209ENST00000533196 GPBP1Q86WP2 473 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 CEP57Q86XR8 500 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 RAD54LQ92698 747 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 WDR6Q9NNW5 1121 aaKnown RBP25.66■■□□□ 1.7
SMPD1-209ENST00000533196 CNTN3Q9P232 1028 aa25.66■■□□□ 1.7
SMPD1-209ENST00000533196 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.66■■□□□ 1.7
SMPD1-209ENST00000533196 RPL17P18621 184 aaKnown RBP25.65■■□□□ 1.7
SMPD1-209ENST00000533196 ZNF131P52739 623 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 OSTNP61366 133 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 HAUS6Q7Z4H7 955 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 SUGP1Q8IWZ8 645 aaKnown RBP25.65■■□□□ 1.7
SMPD1-209ENST00000533196 SMG7Q92540 1137 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms