RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 INTS13Q9NVM9 706 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 IPPQ9Y573 584 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 PCDHB2Q9Y5E7 798 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 MICAL3Q7RTP6 2002 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 A0A1W2PQC6 194 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 GTPBP10A4D1E9 387 aaKnown RBP15.29■□□□□ 0.04
HIF3A-215ENST00000533145 LRRIQ3A6PVS8 624 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-215ENST00000533145 C9IYK1 514 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 TEX33O43247 280 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 ADCY5O95622 1261 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 RAG1P15918 1043 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 PBX1P40424 430 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 DLG4P78352 724 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 TCERG1LQ5VWI1 586 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 MFSD5Q6N075 450 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 SLC24A5Q71RS6 500 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 NT5DC4Q86YG4 428 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 HACE1Q8IYU2 909 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 VWCEQ96DN2 955 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 ERGIC2Q96RQ1 377 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 FNBP1Q96RU3 617 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 CGRRF1Q99675 332 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 HTATIP2Q9BUP3 242 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 PDE11AQ9HCR9 933 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
HIF3A-215ENST00000533145 TTC3P53804 2025 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 LACTBL1A8MY62 500 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 ENPP3O14638 875 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 N4BP1O75113 896 aaKnown RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 EOMESO95936 686 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 CXCL8P10145 99 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 ITGB8P26012 769 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 CDC25BP30305 580 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 FMO5P49326 533 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 WNT7BP56706 349 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 OSTNP61366 133 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 PPP3CAQ08209 521 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 DCAF17Q5H9S7 520 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 CNKSR3Q6P9H4 555 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 C15orf39Q6ZRI6 1047 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 ZNF598Q86UK7 904 aaKnown RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 ECHDC2Q86YB7 292 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 WDR49Q8IV35 697 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 TMEM199Q8N511 208 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 LINC01599Q8WXQ3 324 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 ZNF516Q92618 1163 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 CCDC127Q96BQ5 260 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 PGBD4Q96DM1 585 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 NXF3Q9H4D5 531 aaKnown RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 ELAC1Q9H777 363 aaKnown RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 UBN1Q9NPG3 1134 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 TOPORSQ9NS56 1045 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-215ENST00000533145 GIT1Q9Y2X7 761 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 DERAQ9Y315 318 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
HIF3A-215ENST00000533145 LTBP2Q14767 1821 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 RECQL4O94761 1208 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 C4BPAP04003 597 aaKnown RBP15.27■□□□□ 0.04
HIF3A-215ENST00000533145 PFKMP08237 780 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 TRIM49P0CI25 452 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 TRIM49CP0CI26 452 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 ITGA4P13612 1032 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 UBXN1Q04323 297 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 ZBTB6Q15916 424 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 FKBP15Q5T1M5 1219 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 KRT39Q6A163 491 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 RPUSD2Q8IZ73 545 aaKnown RBP15.27■□□□□ 0.04
HIF3A-215ENST00000533145 SNX27Q96L92 541 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 POP1Q99575 1024 aaKnown RBP15.27■□□□□ 0.04
HIF3A-215ENST00000533145 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-215ENST00000533145 CNTN3Q9P232 1028 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 C2CD2Q9Y426 696 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 HES2Q9Y543 173 aa15.27■□□□□ 0.04
HIF3A-215ENST00000533145 INPPL1O15357 1258 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 DLATP10515 647 aaKnown RBP15.26■□□□□ 0.03
HIF3A-215ENST00000533145 KCNE1P15382 129 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 ATF7P17544 494 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-215ENST00000533145 TNNI1P19237 187 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 KCNMA1Q12791 1236 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 ZACNQ401N2 412 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 CBWD6Q4V339 395 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 CBWD3Q5JTY5 395 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 CBWD5Q5RIA9 395 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 AGMOQ6ZNB7 445 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 SV2AQ7L0J3 742 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 CACTINQ8WUQ7 758 aaKnown RBP15.26■□□□□ 0.03
HIF3A-215ENST00000533145 ANP32BQ92688 251 aaKnown RBP15.26■□□□□ 0.03
HIF3A-215ENST00000533145 TMEM117Q9H0C3 514 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 PRDM5Q9NQX1 630 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-215ENST00000533145 PRKAG2Q9UGJ0 569 aa15.26■□□□□ 0.03
HIF3A-215ENST00000533145 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-215ENST00000533145 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
HIF3A-215ENST00000533145 ITIH6Q6UXX5 1313 aa15.25■□□□□ 0.03
HIF3A-215ENST00000533145 PES1O00541 588 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms