RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 USP41Q3LFD5 358 aa33.18■■■□□ 2.9
SSSCA1-207ENST00000533115 GLRA4Q5JXX5 417 aa33.18■■■□□ 2.9
SSSCA1-207ENST00000533115 PPP1R10Q96QC0 940 aaKnown RBP33.18■■■□□ 2.9
SSSCA1-207ENST00000533115 ADAM7Q9H2U9 754 aa33.18■■■□□ 2.9
SSSCA1-207ENST00000533115 SCP2P22307 547 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 XKR4Q5GH76 650 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 RRAGBQ5VZM2 374 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 ALKAL1Q6UXT8 129 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 B3GALT6Q96L58 329 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 ZNF396Q96N95 335 aaPredicted RBP33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 ACAP3Q96P50 834 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 RXFP1Q9HBX9 757 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 ANKFY1Q9P2R3 1169 aa33.17■■■□□ 2.9
SSSCA1-207ENST00000533115 SF3B1O75533 1304 aaKnown RBP eCLIP33.17■■■□□ 2.99e-6■■■■■ 68.9
SSSCA1-207ENST00000533115 TBCAO75347 108 aaKnown RBP33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 KIF4AO95239 1232 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 HARSP12081 509 aaKnown RBP33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 NOLC1Q14978 699 aaKnown RBP eCLIP33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 STK38Q15208 465 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 CES5AQ6NT32 575 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 GPR65Q8IYL9 337 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 LINC00301Q8NCQ3 95 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 HASPINQ8TF76 798 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 ZHX3Q9H4I2 956 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 MYH15Q9Y2K3 1946 aa33.16■■■□□ 2.9
SSSCA1-207ENST00000533115 SMIM28A0A1B0GU29 152 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 LOC730098B7Z3J9 87 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 K7ENM7 598 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 TEX28O15482 410 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 TRAK2O60296 914 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 ADH1AP07327 375 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 TRIP11Q15643 1979 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 RARS2Q5T160 578 aaKnown RBP33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 C12orf76Q8N812 135 aaPredicted RBP33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 BICD1Q96G01 975 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 FBXL18Q96ME1 805 aa33.15■■■□□ 2.9
SSSCA1-207ENST00000533115 CLDN3O15551 220 aa33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 ALADP13716 330 aa33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 MCL1Q07820 350 aa33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 FOXD4L5Q5VV16 416 aaPredicted RBP33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 FOXD4L4Q8WXT5 416 aaPredicted RBP33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 SNX27Q96L92 541 aa33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 TFIP11Q9UBB9 837 aaKnown RBP33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 CDH22Q9UJ99 828 aa33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 TBX20Q9UMR3 447 aa33.14■■■□□ 2.9
SSSCA1-207ENST00000533115 ZSCAN22P10073 491 aaPredicted RBP33.13■■■□□ 2.89
SSSCA1-207ENST00000533115 RIN2Q8WYP3 895 aaPredicted RBP33.13■■■□□ 2.89
SSSCA1-207ENST00000533115 RPGRIP1Q96KN7 1286 aa33.13■■■□□ 2.89
SSSCA1-207ENST00000533115 UROC1Q96N76 676 aa33.13■■■□□ 2.89
SSSCA1-207ENST00000533115 FIZ1Q96SL8 496 aa33.13■■■□□ 2.89
SSSCA1-207ENST00000533115 SPTLC2O15270 562 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 MATR3P43243 847 aaKnown RBP eCLIP33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 KANK3Q6NY19 840 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 CCDC73Q6ZRK6 1079 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 SV2BQ7L1I2 683 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 RNF135Q8IUD6 432 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 SPRYD3Q8NCJ5 442 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 NECTIN4Q96NY8 510 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 SFXN1Q9H9B4 322 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 FNIP2Q9P278 1114 aa33.12■■■□□ 2.89
SSSCA1-207ENST00000533115 DCXO43602 365 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 PPP6R2O75170 966 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 KCNE1P15382 129 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 MTHFRP42898 656 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 LIG4P49917 911 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 CLCNKBP51801 687 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 ELAVL2Q12926 359 aaKnown RBP33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 RTP2Q5QGT7 225 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 DCLRE1AQ6PJP8 1040 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 DYMQ7RTS9 669 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 RIPOR3Q96MK2 946 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 ZMAT2Q96NC0 199 aaKnown RBP33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 TTPALQ9BTX7 342 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 HAPLN2Q9GZV7 340 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 GOLGA2P5Q9HBQ8 144 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 SLC38A7Q9NVC3 462 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 CNTN3Q9P232 1028 aa33.11■■■□□ 2.89
SSSCA1-207ENST00000533115 SPDYE4A6NLX3 237 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 TMEM189-UBE2V1I3L0A0 370 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 F13A1P00488 732 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 PIGRP01833 764 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 NMT1P30419 496 aaKnown RBP33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 ABCD1P33897 745 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 CREMQ03060 361 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 UPP1Q16831 310 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 SEZ6Q53EL9 994 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 FAM171A1Q5VUB5 890 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 DDX12PQ92771 950 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 PANK2Q9BZ23 570 aa33.1■■■□□ 2.89
SSSCA1-207ENST00000533115 CITO14578 2027 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 MYMKA6NI61 221 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 HNRNPDLO14979 420 aaKnown RBP33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 MEFVO15553 781 aaPredicted RBP33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 B3GAT3O94766 335 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 YEATS4O95619 227 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 GLUD1P00367 558 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 WEE2P0C1S8 567 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 STAT6P42226 847 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 GTF2BQ00403 316 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms