RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 SLFN14P0C7P3 912 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDC27-208ENST00000532575 TCF7P36402 384 aaPredicted RBP9.44□□□□□ -0.9
CDC27-208ENST00000532575 ZXDAP98168 799 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 SP4Q02446 784 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 MGAT3Q09327 533 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 CBX2Q14781 532 aaPredicted RBP9.44□□□□□ -0.9
CDC27-208ENST00000532575 SART3Q15020 963 aaKnown RBP9.44□□□□□ -0.9
CDC27-208ENST00000532575 FBXO47Q5MNV8 452 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 FAM20CQ8IXL6 584 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 FBXL6Q8N531 539 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 SMRP1Q8NCR6 262 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 SPPL3Q8TCT6 385 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 DNAJB3Q8WWF6 145 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 SEPT1Q8WYJ6 367 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 GLG1Q92896 1179 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 PHF7Q9BWX1 381 aaPredicted RBP9.44□□□□□ -0.9
CDC27-208ENST00000532575 SMARCAD1Q9H4L7 1026 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 HIF3AQ9Y2N7 669 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 RAXQ9Y2V3 346 aa9.44□□□□□ -0.9
CDC27-208ENST00000532575 MBLAC1A4D2B0 266 aaPredicted RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 MAFGO15525 162 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 CSPG5O95196 566 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 ITGB1P05556 798 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 ATF7P17544 494 aaPredicted RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 RRP1P56182 461 aaKnown RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 RPS26P62854 115 aaKnown RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 MRPS6P82932 125 aaKnown RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 UBE3AQ05086 875 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 SIGLEC14Q08ET2 396 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 CAMK1Q14012 370 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 AGMOQ6ZNB7 445 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 PRSS33Q8NF86 280 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 MICAL1Q8TDZ2 1067 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 POF1BQ8WVV4 589 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 GPRASP2Q96D09 838 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 CDCA3Q99618 268 aaPredicted RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 RWDD1Q9H446 243 aaPredicted RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 TLE6Q9H808 572 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 CRIM1Q9NZV1 1036 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 CLEC1BQ9P126 229 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 PCDHB12Q9Y5F1 795 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 CDY2AQ9Y6F7 541 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 MRPL42Q9Y6G3 142 aaKnown RBP9.43□□□□□ -0.9
CDC27-208ENST00000532575 MYH7BA7E2Y1 1941 aa9.43□□□□□ -0.9
CDC27-208ENST00000532575 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
CDC27-208ENST00000532575 CYTH3O43739 400 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 SRGAP2BP0DMP2 458 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 MARK3P27448 753 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 SMARCA1P28370 1054 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 CD52P31358 61 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 NRIP1P48552 1158 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 USP11P51784 963 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 ID3Q02535 119 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 WTAPQ15007 396 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 ODR4Q5SWX8 454 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 SCARA3Q6AZY7 606 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 CYB5R4Q7L1T6 521 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 CATIPQ7Z7H3 387 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 RALYLQ86SE5 291 aaKnown RBP9.42□□□□□ -0.9
CDC27-208ENST00000532575 CHD1LQ86WJ1 897 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 NME8Q8N427 588 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 GAL3ST3Q96A11 431 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 RRP36Q96EU6 259 aaKnown RBP9.42□□□□□ -0.9
CDC27-208ENST00000532575 KCNF1Q9H3M0 494 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 AZI2Q9H6S1 392 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 AGO3Q9H9G7 860 aaKnown RBP9.42□□□□□ -0.9
CDC27-208ENST00000532575 FAM105AQ9NUU6 356 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
CDC27-208ENST00000532575 TLR6Q9Y2C9 796 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
CDC27-208ENST00000532575 SUPT16HQ9Y5B9 1047 aaKnown RBP9.42□□□□□ -0.9
CDC27-208ENST00000532575 PCDHB7Q9Y5E2 793 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 PCDHB5Q9Y5E4 795 aa9.42□□□□□ -0.9
CDC27-208ENST00000532575 WDFY4Q6ZS81 3184 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 RALGAPA2Q2PPJ7 1873 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 RBAK-RBAKDNI3L0D1 243 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 SCG2P13521 617 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 KCNA2P16389 499 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 TFE3P19532 575 aaPredicted RBP9.41□□□□□ -0.9
CDC27-208ENST00000532575 DNAJB1P25685 340 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 MAP4P27816 1152 aaKnown RBP9.41□□□□□ -0.9
CDC27-208ENST00000532575 KIF5BP33176 963 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 GNAQP50148 359 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 IGBP1P78318 339 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 TROAPQ12815 778 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 TCF15Q12870 199 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 PAK2Q13177 524 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 SLC35G1Q2M3R5 365 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 ZC3H12AQ5D1E8 599 aaKnown RBP9.41□□□□□ -0.9
CDC27-208ENST00000532575 MARCH8Q5T0T0 291 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 SPOUT1Q5T280 376 aaKnown RBP9.41□□□□□ -0.9
CDC27-208ENST00000532575 USP17L6PQ6QN14 398 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 ADGRD2Q7Z7M1 963 aa9.41□□□□□ -0.9
CDC27-208ENST00000532575 RBM23Q86U06 439 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms