RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 KRT33BQ14525 404 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 C10orf76Q5T2E6 689 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 ATP2A3Q93084 1043 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 PORCNQ9H237 461 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 SP110Q9HB58 689 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 NOC2LQ9Y3T9 749 aaKnown RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 EIF3CLB5ME19 914 aaKnown RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 OGTO15294 1046 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 FTLP02792 175 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 FMO5P49326 533 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 GPC5P78333 572 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 LMNB2Q03252 620 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 MAP7D1Q3KQU3 841 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 CYP4A22Q5TCH4 519 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 DENND2CQ68D51 928 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 CCDC170Q8IYT3 715 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.47□□□□□ -1.055e-6■■■□□ 16.7
CTNND1-230ENST00000532245 EIF3CQ99613 913 aaKnown RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 NUP85Q9BW27 656 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 DYRK4Q9NR20 520 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 PDGFCQ9NRA1 345 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 SMYD2Q9NRG4 433 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 SYNPO2Q9UMS6 1093 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 H7C4K7 107 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 EIF3DO15371 548 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 NPM3O75607 178 aaKnown RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 RHOBTB3O94955 611 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 EGFRP00533 1210 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 PNPLA4P41247 253 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 ORC1Q13415 861 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 NTRK3Q16288 839 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 RHOT2Q8IXI1 618 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 RBBP8NLQ8NC74 664 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 NKX2-3Q8TAU0 364 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 UBA3Q8TBC4 463 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 TTC1Q99614 292 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 KLHL8Q9P2G9 620 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 MSRAQ9UJ68 235 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 NAGPAQ9UK23 515 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 TRPV2Q9Y5S1 764 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 AHDC1Q5TGY3 1603 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 MFAP3LO75121 409 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 GRAP2O75791 330 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 CRHR2Q13324 411 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 ANKS1AQ92625 1134 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 MTMR12Q9C0I1 747 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 USP20Q9Y2K6 914 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 CCDC66A2RUB6 948 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 DFFAO00273 331 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 SART1O43290 800 aaKnown RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 TUBBP07437 444 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 PPP2R5EQ16537 467 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 KIAA1755Q5JYT7 1200 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 HHATQ5VTY9 493 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 RNF25Q96BH1 459 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 SLITRK1Q96PX8 696 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 ADAM2Q99965 735 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 DDX50Q9BQ39 737 aaKnown RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 TRIM62Q9BVG3 475 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 CYB561D2O14569 222 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 TEX33O43247 280 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 CPP00450 1065 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 SOX5P35711 763 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 ST8SIA6P61647 398 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 THOC5Q13769 683 aaKnown RBP8.46□□□□□ -1.05
CTNND1-230ENST00000532245 C10orf120Q5SQS8 335 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 MICALCLQ6ZW33 695 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 BZW1Q7L1Q6 419 aaKnown RBP8.46□□□□□ -1.05
CTNND1-230ENST00000532245 VSIG10LQ86VR7 867 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 ADSSL1Q8N142 457 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 MTMR14Q8NCE2 650 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.46□□□□□ -1.056e-14■□□□□ 9.9
CTNND1-230ENST00000532245 CPA5Q8WXQ8 436 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 CDKL2Q92772 493 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 TSPYL2Q9H2G4 693 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-230ENST00000532245 EHD2Q9NZN4 543 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 SMIM10L2AP0DMW4 78 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 SMIM10L2BP0DMW5 78 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 KLRC2P26717 231 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 RWDD2BP57060 319 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 MYLK4Q86YV6 388 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-230ENST00000532245 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 SLC30A5Q8TAD4 765 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 ZNF564Q8TBZ8 553 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-230ENST00000532245 IFT43Q96FT9 208 aa8.46□□□□□ -1.05
CTNND1-230ENST00000532245 APLP1P51693 650 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 PRKCZQ05513 592 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 RAPH1Q70E73 1250 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 P3H4Q92791 437 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 HVCN1Q96D96 273 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 AGPAT3Q9NRZ7 376 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 TIMM13Q9Y5L4 95 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-230ENST00000532245 SNCAIPQ9Y6H5 919 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 LMO7Q8WWI1 1683 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 TOM1L1O75674 476 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 CDC25BP30305 580 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 WHAMMP3Q1A5X7 153 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms