RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 TCF15Q12870 199 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 NAB2Q15742 525 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 PSMD5Q16401 504 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 LILRA6Q6PI73 481 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 CEP57Q86XR8 500 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 PIK3R5Q8WYR1 880 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 ZNF707Q96C28 371 aaPredicted RBP22.97■■□□□ 1.27
SMPD1-204ENST00000530395 MRPL4Q9BYD3 311 aaKnown RBP22.97■■□□□ 1.27
SMPD1-204ENST00000530395 NT5C3AQ9H0P0 336 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 KCNK12Q9HB15 430 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 VWA8A3KMH1 1905 aa22.97■■□□□ 1.27
SMPD1-204ENST00000530395 DOCK8Q8NF50 2099 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 H3BQV1 296 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 PAPLNO95428 1278 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 NPTX2P47972 431 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 YARSP54577 528 aaKnown RBP22.96■■□□□ 1.27
SMPD1-204ENST00000530395 LIN9Q5TKA1 542 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 UROC1Q96N76 676 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 TIPINQ9BVW5 301 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 CCDC94Q9BW85 323 aaPredicted RBP22.96■■□□□ 1.27
SMPD1-204ENST00000530395 PRKD2Q9BZL6 878 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 CXCL16Q9H2A7 254 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 TMEM134Q9H6X4 195 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 C17orf75Q9HAS0 396 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 KMT5AQ9NQR1 393 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 TOPORSQ9NS56 1045 aaPredicted RBP22.96■■□□□ 1.27
SMPD1-204ENST00000530395 DUSP12Q9UNI6 340 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 RBM19Q9Y4C8 960 aaKnown RBP22.96■■□□□ 1.27
SMPD1-204ENST00000530395 CITO14578 2027 aa22.96■■□□□ 1.27
SMPD1-204ENST00000530395 ZMYND10O75800 440 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 CDC25AP30304 524 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 ATP2C1P98194 919 aaPredicted RBP22.95■■□□□ 1.26
SMPD1-204ENST00000530395 ZRSR1Q15695 479 aaKnown RBP22.95■■□□□ 1.26
SMPD1-204ENST00000530395 IL17AQ16552 155 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 ZNF568Q3ZCX4 644 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 GLRA4Q5JXX5 417 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 RINT1Q6NUQ1 792 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.95■■□□□ 1.26
SMPD1-204ENST00000530395 USP34Q70CQ2 3546 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 DAW1Q8N136 415 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 LNX1Q8TBB1 728 aaPredicted RBP22.95■■□□□ 1.26
SMPD1-204ENST00000530395 TMX3Q96JJ7 454 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 PPP1R10Q96QC0 940 aaKnown RBP22.95■■□□□ 1.26
SMPD1-204ENST00000530395 RUSC1Q9BVN2 902 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 EPS15L1Q9UBC2 864 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 FBXW11Q9UKB1 542 aa22.95■■□□□ 1.26
SMPD1-204ENST00000530395 TMEM189-UBE2V1I3L0A0 370 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 N4BP1O75113 896 aaKnown RBP22.94■■□□□ 1.26
SMPD1-204ENST00000530395 GRM5P41594 1212 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 ASTLQ6HA08 431 aaPredicted RBP22.94■■□□□ 1.26
SMPD1-204ENST00000530395 KCTD17Q8N5Z5 321 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 ACO2Q99798 780 aaKnown RBP22.94■■□□□ 1.26
SMPD1-204ENST00000530395 CLSTN3Q9BQT9 956 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 MMTAG2Q9BU76 263 aaKnown RBP22.94■■□□□ 1.26
SMPD1-204ENST00000530395 CDT1Q9H211 546 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.94■■□□□ 1.26
SMPD1-204ENST00000530395 ARHGAP28Q9P2N2 729 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 KCNG1Q9UIX4 513 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 FBXL21Q9UKT6 434 aa22.94■■□□□ 1.26
SMPD1-204ENST00000530395 TRAPPC3O43617 180 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 B3GAT3O94766 335 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 GJB2P29033 226 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 MCM2P49736 904 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 DCLRE1AQ6PJP8 1040 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 C1orf186Q6ZWK4 172 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 GET4Q7L5D6 327 aaPredicted RBP22.93■■□□□ 1.26
SMPD1-204ENST00000530395 NXPE3Q969Y0 559 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 CDK5RAP3Q96JB5 506 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 TCHPQ9BT92 498 aa22.93■■□□□ 1.26
SMPD1-204ENST00000530395 GALR2O43603 387 aaPredicted RBP22.92■■□□□ 1.26
SMPD1-204ENST00000530395 HNRNPA1P09651 372 aaKnown RBP eCLIP22.92■■□□□ 1.26
SMPD1-204ENST00000530395 GUCY2CP25092 1073 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 CLCN5P51795 746 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 CLCNKBP51801 687 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 MAPK7Q13164 816 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 PPM1LQ5SGD2 360 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 KCNK18Q7Z418 384 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 TMEM105Q8N8V8 129 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 MYADMQ96S97 322 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 TARS2Q9BW92 718 aaKnown RBP22.92■■□□□ 1.26
SMPD1-204ENST00000530395 SLC38A7Q9NVC3 462 aa22.92■■□□□ 1.26
SMPD1-204ENST00000530395 VWA3AA6NCI4 1184 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 MCF2P10911 925 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 FGFR3P22607 806 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 SMTNP53814 917 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 OSTNP61366 133 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 STRN3Q13033 797 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 UPP1Q16831 310 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 HYIQ5T013 277 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 CEP120Q8N960 986 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 FLCNQ8NFG4 579 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 ATOH1Q92858 354 aaPredicted RBP22.91■■□□□ 1.26
SMPD1-204ENST00000530395 PHOX2BQ99453 314 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 PTPRHQ9HD43 1115 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 SMC3Q9UQE7 1217 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 MYO15AQ9UKN7 3530 aa22.91■■□□□ 1.26
SMPD1-204ENST00000530395 PDCD11Q14690 1871 aaKnown RBP22.9■■□□□ 1.26
SMPD1-204ENST00000530395 SMIM28A0A1B0GU29 152 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 SLC16A4O15374 487 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 C8AP07357 584 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms