RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 FCRL2Q96LA5 508 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 RNF26Q9BY78 433 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 SLKQ9H2G2 1235 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 MROH8Q9H579 483 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 RNF146Q9NTX7 359 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 GJD2Q9UKL4 321 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 CCPG1Q9ULG6 757 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 RBBP6Q7Z6E9 1792 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 STK36Q9NRP7 1315 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 PDE4DIPQ5VU43 2346 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 TMEM82A0PJX8 343 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 PRPF3O43395 683 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 DTNBO60941 627 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 MPOP05164 745 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 ALAS1P13196 640 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 RTP1P59025 263 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 ERVFRD-1P60508 538 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 ARSHQ5FYA8 562 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 WWC2Q6AWC2 1192 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 FBXO46Q6PJ61 603 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 DBX2Q6ZNG2 339 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 PLEKHH3Q7Z736 793 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 NSUN7Q8NE18 718 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 CHST13Q8NET6 341 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 RRP36Q96EU6 259 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 TMX3Q96JJ7 454 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 ZSCAN31Q96LW9 406 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 FGD4Q96M96 766 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 AMNQ9BXJ7 453 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 PNMA2Q9UL42 364 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 LCTP09848 1927 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 ABCB11O95342 1321 aa10.05□□□□□ -0.8
CCDC90B-217ENST00000530253 SMCHD1A6NHR9 2005 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 PTPDC1A2A3K4 754 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 STXBP3O00186 592 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 TNPO2O14787 897 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 JAK2O60674 1132 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 UBOX5O94941 541 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 SYPP08247 313 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 FDPSP14324 419 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 MCM2P49736 904 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 PRKCZQ05513 592 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 LAPTM5Q13571 262 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 PKN2Q16513 984 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 PFKFB3Q16875 520 aaPredicted RBP10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 USH1GQ495M9 461 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 SLC30A10Q6XR72 485 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 CCDC83Q8IWF9 413 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 SMARCC2Q8TAQ2 1214 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 SNX21Q969T3 373 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 COA7Q96BR5 231 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 ACAD9Q9H845 621 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 CNTD2Q9H8S5 307 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 A1CFQ9NQ94 594 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 HOMER2Q9NSB8 354 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 SRRDQ9UH36 339 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 FBXO40Q9UH90 709 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 GABRQQ9UN88 632 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 PTPN22Q9Y2R2 807 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 CTDP1Q9Y5B0 961 aaPredicted RBP10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 PCDHA1Q9Y5I3 950 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 ASTN1O14525 1302 aa10.04□□□□□ -0.8
CCDC90B-217ENST00000530253 KIAA0100Q14667 2235 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 SLC15A5A6NIM6 579 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 SLC22A31A6NKX4 558 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 HOXC6P09630 235 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 SCG2P13521 617 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 ADORA2AP29274 412 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 CCNFP41002 786 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 RGS19P49795 217 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 EPHB3P54753 998 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 CUL4AQ13619 759 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 BBS9Q3SYG4 887 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 FAM133AQ8N9E0 248 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 RGS22Q8NE09 1264 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 SOCS4Q8WXH5 440 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 TBC1D5Q92609 795 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 AIFM3Q96NN9 605 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 LRRC3Q9BY71 257 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 XYLT2Q9H1B5 865 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 BARHL2Q9NY43 387 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 CYP39A1Q9NYL5 469 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 COL20A1Q9P218 1284 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 VTI1BQ9UEU0 232 aa10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 BAZ2BQ9UIF8 2168 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-217ENST00000530253 CEP290O15078 2479 aa10.02□□□□□ -0.8
CCDC90B-217ENST00000530253 LRRC37A2A6NM11 1700 aa10.02□□□□□ -0.8
CCDC90B-217ENST00000530253 CPLX1O14810 134 aa10.02□□□□□ -0.81
CCDC90B-217ENST00000530253 ADAMTS3O15072 1205 aa10.02□□□□□ -0.81
CCDC90B-217ENST00000530253 SIGLEC6O43699 453 aa10.02□□□□□ -0.81
CCDC90B-217ENST00000530253 STRNO43815 780 aa10.02□□□□□ -0.81
CCDC90B-217ENST00000530253 CDKL5O76039 1030 aa10.02□□□□□ -0.81
CCDC90B-217ENST00000530253 DEXIO95424 95 aa10.02□□□□□ -0.81
CCDC90B-217ENST00000530253 FCER1AP12319 257 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms