RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 SLC22A17Q8WUG5 538 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 SUSD6Q92537 303 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 PPP1R10Q96QC0 940 aaKnown RBP16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 CCDC94Q9BW85 323 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 S1PR5Q9H228 398 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 RXFP1Q9HBX9 757 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 TOPORSQ9NS56 1045 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 ADAM28Q9UKQ2 775 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 SPTLC2O15270 562 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 TRAK2O60296 914 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 FAM13AO94988 1023 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 RBM10P98175 930 aaKnown RBP16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 GTF2BQ00403 316 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 DSG1Q02413 1049 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 ZP2Q05996 745 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 MCL1Q07820 350 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 HSP90AA2PQ14568 343 aaPredicted RBP16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 KIAA0319Q5VV43 1072 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 SYCE2Q6PIF2 218 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 CEP120Q8N960 986 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 POP1Q99575 1024 aaKnown RBP16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 CXCL16Q9H2A7 254 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 MRPL17Q9NRX2 175 aaKnown RBP16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 DZANK1Q9NVP4 752 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 SEL1LQ9UBV2 794 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 GDAQ9Y2T3 454 aa16.93■□□□□ 0.3
CCDC90B-215ENST00000529745 C2orf16Q68DN1 1984 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 URODP06132 367 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 ALADP13716 330 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 KCNE1P15382 129 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 GLUD2P49448 558 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 YARSP54577 528 aaKnown RBP16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 CLUL1Q15846 466 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 GJD3Q8N144 294 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 MYCT1Q8N699 235 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 AUTS2Q8WXX7 1259 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 DNAJC19Q96DA6 116 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 UROC1Q96N76 676 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 KLHL5Q96PQ7 755 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 EMILIN2Q9BXX0 1053 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 CNTN3Q9P232 1028 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 TBX20Q9UMR3 447 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 USP15Q9Y4E8 981 aaPredicted RBP16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 TCHHQ07283 1943 aa16.92■□□□□ 0.3
CCDC90B-215ENST00000529745 C5orf42Q9H799 3197 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 A0A087X0B3 334 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 F8W810 466 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 CUTAO60888 179 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 TBCAO75347 108 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 PAPLNO95428 1278 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 KRT18P05783 430 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 CNPP09543 421 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 CLCN4P51793 760 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 USP41Q3LFD5 358 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 TAS1R1Q7RTX1 841 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 MAP4K3Q8IVH8 894 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 DDX12PQ92771 950 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 HVCN1Q96D96 273 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 ZBTB45Q96K62 511 aaPredicted RBP16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 ACAP3Q96P50 834 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 PAAF1Q9BRP4 392 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 STRA6Q9BX79 667 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 GPR62Q9BZJ7 368 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 CUEDC2Q9H467 287 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 FNIP2Q9P278 1114 aa16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
CCDC90B-215ENST00000529745 SF3B1O75533 1304 aaKnown RBP eCLIP16.91■□□□□ 0.38e-6■■■■■ 107
CCDC90B-215ENST00000529745 SMIM28A0A1B0GU29 152 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 FRMD3A2A2Y4 597 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 MYMKA6NI61 221 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 K7ENM7 598 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 CLDN3O15551 220 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 PPP1R37O75864 691 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 ITIH3Q06033 890 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 ELAVL2Q12926 359 aaKnown RBP16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 PKP1Q13835 747 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 E2F4Q16254 413 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 KYAT1Q16773 422 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 KCNG4Q8TDN1 519 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 TCHPQ9BT92 498 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 HAPLN2Q9GZV7 340 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 OLFML3Q9NRN5 406 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 SLC38A7Q9NVC3 462 aa16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.9■□□□□ 0.3
CCDC90B-215ENST00000529745 SPTBN4Q9H254 2564 aa16.89■□□□□ 0.3
CCDC90B-215ENST00000529745 CASTOR2A6NHX0 329 aa16.89■□□□□ 0.29
CCDC90B-215ENST00000529745 MEFVO15553 781 aaPredicted RBP16.89■□□□□ 0.29
CCDC90B-215ENST00000529745 FAM189A1O60320 539 aa16.89■□□□□ 0.29
CCDC90B-215ENST00000529745 TADA2AO75478 443 aa16.89■□□□□ 0.29
CCDC90B-215ENST00000529745 KIF4AO95239 1232 aa16.89■□□□□ 0.29
CCDC90B-215ENST00000529745 ADRB2P07550 413 aa16.89■□□□□ 0.29
CCDC90B-215ENST00000529745 GAP43P17677 238 aa16.89■□□□□ 0.29
CCDC90B-215ENST00000529745 STAT6P42226 847 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms