RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 ZNF233A6NK53 670 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 GJB1P08034 283 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 H2AFXP16104 143 aaPredicted RBP25.06■■□□□ 1.6
LTBP3-212ENST00000529189 BMS1Q14692 1282 aaKnown RBP25.06■■□□□ 1.6
LTBP3-212ENST00000529189 LHX8Q68G74 356 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 CCSAPQ6IQ19 270 aaPredicted RBP25.06■■□□□ 1.6
LTBP3-212ENST00000529189 RSRC2Q7L4I2 434 aaKnown RBP25.06■■□□□ 1.6
LTBP3-212ENST00000529189 ARHGEF19Q8IW93 802 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.06■■□□□ 1.64e-6■■■□□ 16.2
LTBP3-212ENST00000529189 UBE2TQ9NPD8 197 aaPredicted RBP25.06■■□□□ 1.6
LTBP3-212ENST00000529189 PUF60Q9UHX1 559 aaKnown RBP25.06■■□□□ 1.6
LTBP3-212ENST00000529189 NAGPAQ9UK23 515 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 SCN10AQ9Y5Y9 1956 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 ATP8B3O60423 1300 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 NRCAMQ92823 1304 aa25.06■■□□□ 1.6
LTBP3-212ENST00000529189 RRN3P2A6NIE6 340 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 MYCP01106 439 aaPredicted RBP25.05■■□□□ 1.6
LTBP3-212ENST00000529189 ASGR1P07306 291 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 RNF180Q86T96 592 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 LINC01465Q8N7H1 131 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 UNC93B1Q9H1C4 597 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 SALL4Q9UJQ4 1053 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 NENFQ9UMX5 172 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 COQ4Q9Y3A0 265 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 TULP1O00294 542 aaPredicted RBP25.05■■□□□ 1.6
LTBP3-212ENST00000529189 LAMTOR4Q0VGL1 99 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 HIC1Q14526 733 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 TEX35Q5T0J7 233 aa25.05■■□□□ 1.6
LTBP3-212ENST00000529189 ALKBH5Q6P6C2 394 aaKnown RBP25.05■■□□□ 1.6
LTBP3-212ENST00000529189 AGO2Q9UKV8 859 aaKnown RBP25.05■■□□□ 1.6
LTBP3-212ENST00000529189 EFNA5P52803 228 aa25.04■■□□□ 1.6
LTBP3-212ENST00000529189 MXD4Q14582 209 aaPredicted RBP25.04■■□□□ 1.6
LTBP3-212ENST00000529189 NFRKBQ6P4R8 1299 aa25.04■■□□□ 1.6
LTBP3-212ENST00000529189 RHPN2Q8IUC4 686 aa25.04■■□□□ 1.6
LTBP3-212ENST00000529189 C7orf31Q8N865 590 aa25.04■■□□□ 1.6
LTBP3-212ENST00000529189 POP1Q99575 1024 aaKnown RBP25.04■■□□□ 1.6
LTBP3-212ENST00000529189 PACSIN1Q9BY11 444 aa25.04■■□□□ 1.6
LTBP3-212ENST00000529189 TOPORSQ9NS56 1045 aaPredicted RBP25.04■■□□□ 1.6
LTBP3-212ENST00000529189 BTNL10A8MVZ5 291 aa25.04■■□□□ 1.6
LTBP3-212ENST00000529189 NAP1L1P55209 391 aaKnown RBP25.04■■□□□ 1.6
LTBP3-212ENST00000529189 FBXO38Q6PIJ6 1188 aa25.04■■□□□ 1.6
LTBP3-212ENST00000529189 PCSK9Q8NBP7 692 aaKnown RBP25.04■■□□□ 1.6
LTBP3-212ENST00000529189 TARS2Q9BW92 718 aaKnown RBP25.04■■□□□ 1.6
LTBP3-212ENST00000529189 FOXN3O00409 490 aaPredicted RBP25.03■■□□□ 1.6
LTBP3-212ENST00000529189 DDX3XO00571 662 aaKnown RBP eCLIP25.03■■□□□ 1.6
LTBP3-212ENST00000529189 BUB1O43683 1085 aa25.03■■□□□ 1.6
LTBP3-212ENST00000529189 LRRN2O75325 713 aa25.03■■□□□ 1.6
LTBP3-212ENST00000529189 DLATP10515 647 aaKnown RBP25.03■■□□□ 1.6
LTBP3-212ENST00000529189 LBX1P52954 281 aa25.03■■□□□ 1.6
LTBP3-212ENST00000529189 FBXL13Q8NEE6 735 aa25.03■■□□□ 1.6
LTBP3-212ENST00000529189 RABGGTAQ92696 567 aa25.03■■□□□ 1.6
LTBP3-212ENST00000529189 ZNF668Q96K58 619 aaPredicted RBP25.03■■□□□ 1.6
LTBP3-212ENST00000529189 CTAGE15A4D2H0 777 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 LDHAP00338 332 aaKnown RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 TFRCP02786 760 aaKnown RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 CTAGE8P0CG41 777 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 SRGAP2CP0DJJ0 459 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 HSPA1AP0DMV8 641 aaKnown RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 HSPA1BP0DMV9 641 aaKnown RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 GPC3P51654 580 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 PSMD6Q15008 389 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 MTFR1Q15390 333 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 NBPF20Q3BBV1 942 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 CDCA2Q69YH5 1023 aaPredicted RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 CTU1Q7Z7A3 348 aaKnown RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 CTAGE6Q86UF2 777 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 CTAGE4Q8IX94 777 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 SEMA4DQ92854 862 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 AKT3Q9Y243 479 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 MBLAC1A4D2B0 266 aaPredicted RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 TMOD1P28289 359 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 MATR3P43243 847 aaKnown RBP eCLIP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 NLRP11P59045 1033 aaKnown RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 TUBB4BP68371 445 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 ZNF200P98182 395 aaPredicted RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 ZBTB8OSQ8IWT0 167 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 RNF149Q8NC42 400 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 ZBTB45Q96K62 511 aaPredicted RBP25.02■■□□□ 1.6
LTBP3-212ENST00000529189 NLRP4Q96MN2 994 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 SYT11Q9BT88 431 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 MSTO1Q9BUK6 570 aa25.02■■□□□ 1.6
LTBP3-212ENST00000529189 C17orf102A2RUQ5 167 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 ADAM17P78536 824 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 ZPBP2Q6X784 338 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 SV2AQ7L0J3 742 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 GPR161Q8N6U8 529 aaKnown RBP25.01■■□□□ 1.59
LTBP3-212ENST00000529189 SLC30A5Q8TAD4 765 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 OLIG1Q8TAK6 271 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 LNX1Q8TBB1 728 aaPredicted RBP25.01■■□□□ 1.59
LTBP3-212ENST00000529189 U2AF1L4Q8WU68 220 aaKnown RBP25.01■■□□□ 1.59
LTBP3-212ENST00000529189 PPP1R16BQ96T49 567 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 HAPLN2Q9GZV7 340 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 C2orf40Q9H1Z8 148 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 RAB20Q9NX57 234 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 ANKFY1Q9P2R3 1169 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 INTUQ9ULD6 942 aa25.01■■□□□ 1.59
LTBP3-212ENST00000529189 A0A0B4J269 797 aa25■■□□□ 1.59
LTBP3-212ENST00000529189 VTNP04004 478 aa25■■□□□ 1.59
LTBP3-212ENST00000529189 EDN1P05305 212 aa25■■□□□ 1.59
LTBP3-212ENST00000529189 HOXC8P31273 242 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms