RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZBTB45Q96K62 511 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 UROC1Q96N76 676 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 KLHL5Q96PQ7 755 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 PPP1R10Q96QC0 940 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 POP1Q99575 1024 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 RXFP1Q9HBX9 757 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 DZANK1Q9NVP4 752 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 CFAP45Q9UL16 551 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 TBX20Q9UMR3 447 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 XIRP2A4UGR9 3374 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 SMIM28A0A1B0GU29 152 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 TMEM189-UBE2V1I3L0A0 370 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 CUTAO60888 179 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 CNPP09543 421 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 KCNE1P15382 129 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 KLRC2P26717 231 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 STAT6P42226 847 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 ZP2Q05996 745 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 ITIH3Q06033 890 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 ELAVL2Q12926 359 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 NOLC1Q14978 699 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 KYAT1Q16773 422 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 LLGL2Q6P1M3 1020 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 DCLRE1AQ6PJP8 1040 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 CEP120Q8N960 986 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 KCNG4Q8TDN1 519 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 DDX12PQ92771 950 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 FIZ1Q96SL8 496 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 GPR62Q9BZJ7 368 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 ZHX3Q9H4I2 956 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 CD320Q9NPF0 282 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 SLC38A7Q9NVC3 462 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 SEL1LQ9UBV2 794 aa13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 USP15Q9Y4E8 981 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-209ENST00000528230 SF3B1O75533 1304 aaKnown RBP eCLIP13.24□□□□□ -0.293e-6■■■■■ 137.9
TRAPPC4-209ENST00000528230 CASTOR2A6NHX0 329 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 MYMKA6NI61 221 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 F8W810 466 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 K7ENM7 598 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 GAP43P17677 238 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 SSTR3P32745 418 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 LIG4P49917 911 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 CLCN4P51793 760 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 OSTNP61366 133 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 CREMQ03060 361 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 DYMQ7RTS9 669 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 ZNF720Q7Z2F6 126 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 HVCN1Q96D96 273 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 DNAJC19Q96DA6 116 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 BICD1Q96G01 975 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 SNX27Q96L92 541 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 PAAF1Q9BRP4 392 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 PANK2Q9BZ23 570 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 LRRC27Q9C0I9 530 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 ADAM7Q9H2U9 754 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 PLEKHA5Q9HAU0 1116 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 CNTN3Q9P232 1028 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 FNIP2Q9P278 1114 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-209ENST00000528230 VCANP13611 3396 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 A0A087X0B3 334 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 C2CD2LO14523 706 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 HNRNPDLO14979 420 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 ADH1AP07327 375 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 CLTAP09496 248 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 EPCAMP16422 314 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 NMT1P30419 496 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 RPL9P32969 192 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 MATR3P43243 847 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 PKP1Q13835 747 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 UPP1Q16831 310 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 SLC10A6Q3KNW5 377 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 GLRA4Q5JXX5 417 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 CES5AQ6NT32 575 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 PDXDC1Q6P996 788 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 MAP4K3Q8IVH8 894 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 HDAC7Q8WUI4 952 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 NECTIN4Q96NY8 510 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 TSPAN18Q96SJ8 248 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 PHF7Q9BWX1 381 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 PLXNA3P51805 1871 aa13.23□□□□□ -0.29
TRAPPC4-209ENST00000528230 VWA8A3KMH1 1905 aa13.22□□□□□ -0.29
TRAPPC4-209ENST00000528230 TCHHQ07283 1943 aa13.22□□□□□ -0.29
TRAPPC4-209ENST00000528230 A0A0B4J269 797 aa13.22□□□□□ -0.29
TRAPPC4-209ENST00000528230 FRMD3A2A2Y4 597 aa13.22□□□□□ -0.29
TRAPPC4-209ENST00000528230 LOC730098B7Z3J9 87 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms