RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ERLIN2O94905 339 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 ATP4AP20648 1035 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 ZACNQ401N2 412 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 WDR44Q5JSH3 913 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 CEP85LQ5SZL2 805 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 NAA35Q5VZE5 725 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 CYFIP1Q7L576 1253 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 TRIM11Q96F44 468 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 AGO2Q9UKV8 859 aaKnown RBP16.47■□□□□ 0.23
USH1C-207ENST00000527720 OTOFQ9HC10 1997 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 TMEM110-MUSTN1A8MSY1 372 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
USH1C-207ENST00000527720 PODXLO00592 558 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 MYZAPP0CAP1 466 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 MYBL1P10243 752 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 ARL2P36404 184 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 RFC5P40937 340 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 ALDH5A1P51649 535 aaPredicted RBP16.46■□□□□ 0.23
USH1C-207ENST00000527720 GNGT1P63211 74 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 LBX2Q6XYB7 198 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 GPC2Q8N158 579 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 ANKRD35Q8N283 1001 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 ATP8B4Q8TF62 1192 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 SLC7A3Q8WY07 619 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 PLVAPQ9BX97 442 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 ACP6Q9NPH0 428 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 AVENQ9NQS1 362 aaPredicted RBP16.46■□□□□ 0.23
USH1C-207ENST00000527720 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.46■□□□□ 0.23
USH1C-207ENST00000527720 PCDHB2Q9Y5E7 798 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 GRIN2DO15399 1336 aa16.46■□□□□ 0.23
USH1C-207ENST00000527720 SPOPO43791 374 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 PPFIA2O75334 1257 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 C4BPAP04003 597 aaKnown RBP16.45■□□□□ 0.22
USH1C-207ENST00000527720 KRT5P13647 590 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 NR1D1P20393 614 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 BIRC3Q13489 604 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 CYP1B1Q16678 543 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 JAMLQ86YT9 394 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 RIOX2Q8IUF8 465 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 DEPTORQ8TB45 409 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 FMO2Q99518 471 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 TMEM134Q9H6X4 195 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 MTUS1Q9ULD2 1270 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 PPME1Q9Y570 386 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 ATMINO43313 823 aaPredicted RBP16.45■□□□□ 0.22
USH1C-207ENST00000527720 USP2O75604 605 aaPredicted RBP16.45■□□□□ 0.22
USH1C-207ENST00000527720 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
USH1C-207ENST00000527720 GLRA2P23416 452 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 CCDC125Q86Z20 511 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
USH1C-207ENST00000527720 CEP89Q96ST8 783 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 DPH5Q9H2P9 285 aa16.45■□□□□ 0.22
USH1C-207ENST00000527720 CNOT8Q9UFF9 292 aaKnown RBP16.45■□□□□ 0.22
USH1C-207ENST00000527720 K7ERI5 159 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 TULP2O00295 520 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 TNNI1P19237 187 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 RWDD2BP57060 319 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 SH2D3CQ8N5H7 860 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 PRELID2Q8N945 189 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 ASAP3Q8TDY4 903 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 UBLCP1Q8WVY7 318 aaPredicted RBP16.44■□□□□ 0.22
USH1C-207ENST00000527720 TXLNGYQ9BZA5 131 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 NRBP2Q9NSY0 501 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 ZDHHC18Q9NUE0 388 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 PARP2Q9UGN5 583 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 ZEB2O60315 1214 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 HLA-DRAP01903 254 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 EDNRBP24530 442 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 FLT3P36888 993 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 PTGIRP43119 386 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 EIF3BP55884 814 aaKnown RBP16.44■□□□□ 0.22
USH1C-207ENST00000527720 DHX9Q08211 1270 aaKnown RBP16.44■□□□□ 0.22
USH1C-207ENST00000527720 AGBL2Q5U5Z8 902 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 PPP1R2P3Q6NXS1 205 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 ADAT2Q7Z6V5 191 aaKnown RBP16.44■□□□□ 0.22
USH1C-207ENST00000527720 SRLQ86TD4 932 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 SLC13A5Q86YT5 568 aaPredicted RBP16.44■□□□□ 0.22
USH1C-207ENST00000527720 C12orf50Q8NA57 414 aaPredicted RBP16.44■□□□□ 0.22
USH1C-207ENST00000527720 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 PI4K2AQ9BTU6 479 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 FAM129AQ9BZQ8 928 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
USH1C-207ENST00000527720 LRRIQ4A6NIV6 560 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 SRRM3A6NNA2 597 aaPredicted RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 TGFB3P10600 412 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 PYGMP11217 842 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 PIK3CAP42336 1068 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 ZNF844Q08AG5 666 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 NEDD9Q14511 834 aa16.43■□□□□ 0.22
USH1C-207ENST00000527720 TARBP2Q15633 366 aaKnown RBP16.43■□□□□ 0.22
USH1C-207ENST00000527720 TDRD10Q5VZ19 366 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms