RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CFBP00751 764 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 CREB1P16220 341 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 DLG4P78352 724 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 ADCY1Q08828 1119 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 CPNE8Q86YQ8 564 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 ARHGEF19Q8IW93 802 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 BANK1Q8NDB2 785 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 C1orf54Q8WWF1 131 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 HSD17B14Q9BPX1 270 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 PFASO15067 1338 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 FRMPD4Q14CM0 1322 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 FOXO6A8MYZ6 492 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
CAPN1-208ENST00000527323 GGPS1O95749 300 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 HMGCS2P54868 508 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 TRIP13Q15645 432 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-208ENST00000527323 NSMFQ6X4W1 530 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 ART4Q93070 314 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 RPS6KC1Q96S38 1066 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 TMEM109Q9BVC6 243 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 CDC42EP4Q9H3Q1 356 aaKnown RBP13.38□□□□□ -0.27
CAPN1-208ENST00000527323 SIPA1L1O43166 1804 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 GAS7O60861 476 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 RTN2O75298 545 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 SGPL1O95470 568 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 PEX5P50542 639 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 SYDE2Q5VT97 1194 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 AGAP11Q8TF27 550 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 NUP85Q9BW27 656 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 MRIQ9BWK5 157 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 ROPN1BQ9BZX4 212 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-208ENST00000527323 CCDC134Q9H6E4 229 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 ROPN1Q9HAT0 212 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-208ENST00000527323 ACP6Q9NPH0 428 aa13.38□□□□□ -0.27
CAPN1-208ENST00000527323 BRCA1P38398 1863 aaKnown RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 NEBLO76041 1014 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 BMP3P12645 472 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 CIITAP33076 1130 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 CRYMQ14894 314 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 OTOP1Q7RTM1 612 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 KAT5Q92993 513 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 DMAC2Q9NW81 257 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 NYAP2Q9P242 653 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 TBK1Q9UHD2 729 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 ARHGEF35A5YM69 484 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 K7ENM7 598 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 CLDN3O15551 220 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 VPS41P49754 854 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 RWDD2BP57060 319 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 ZNF280AP59817 542 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 NCALDP61601 193 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 TRMT10CQ7L0Y3 403 aaKnown RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 CYFIP1Q7L576 1253 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 GPC2Q8N158 579 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 ZNF564Q8TBZ8 553 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 PRCCQ92733 491 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 ZNF653Q96CK0 615 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 ZBED3Q96IU2 234 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-208ENST00000527323 NACC1Q96RE7 527 aa13.37□□□□□ -0.27
CAPN1-208ENST00000527323 PAX7P23759 505 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 ATP5DP30049 168 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 STX2P32856 288 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 VAMP7P51809 220 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 RIPK1Q13546 671 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 NFIL3Q16649 462 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-208ENST00000527323 CCHCR1Q8TD31 782 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 IFT74Q96LB3 600 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 PCDHB18PQ96TA0 734 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 PAIP2Q9BPZ3 127 aaKnown RBP13.36□□□□□ -0.27
CAPN1-208ENST00000527323 CTNNAL1Q9UBT7 734 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 PCDHA3Q9Y5H8 950 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 HTTP42858 3142 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 TISP43B9A030 160 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 CYP26A1O43174 497 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 BRAFP15056 766 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 HADHBP55084 474 aaKnown RBP13.36□□□□□ -0.27
CAPN1-208ENST00000527323 COPS2P61201 443 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 KRT17Q04695 432 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 GRM1Q13255 1194 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 KYNUQ16719 465 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 MKL1Q969V6 931 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 NOP53Q9NZM5 478 aaKnown RBP13.36□□□□□ -0.27
CAPN1-208ENST00000527323 PGAP2Q9UHJ9 254 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 DDX39AO00148 427 aaKnown RBP13.36□□□□□ -0.27
CAPN1-208ENST00000527323 THAP12O43422 761 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 DIAPH2O60879 1101 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 HIP1RO75146 1068 aa13.36□□□□□ -0.27
CAPN1-208ENST00000527323 RFX1P22670 979 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms