RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 SPTLC1O15269 473 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 ITGA4P13612 1032 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 STX1AQ16623 288 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 ZNF528Q3MIS6 628 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 ADALQ6DHV7 355 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 SARM1Q6SZW1 724 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 SHDQ96IW2 340 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 B3GALT6Q96L58 329 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 RPP25Q9BUL9 199 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 KCNF1Q9H3M0 494 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 NCDNQ9UBB6 729 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 IPPQ9Y573 584 aa12.89□□□□□ -0.35
RPUSD4-203ENST00000526942 COL4A3Q01955 1670 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 ARL5CA6NH57 179 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 TDP2O95551 362 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 CDC25BP30305 580 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 MLH1P40692 756 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 SCNN1GP51170 649 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 FOSBP53539 338 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 NPEPPSP55786 919 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 PSMC5P62195 406 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 GPC5P78333 572 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 AKAP17AQ02040 695 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 CEBPZQ03701 1054 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 LILRA6Q6PI73 481 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 GLYCTKQ8IVS8 523 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 PRPF31Q8WWY3 499 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 PSPC1Q8WXF1 523 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 SLC7A3Q8WY07 619 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 FGF14Q92915 247 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 GAD1Q99259 594 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 DDX23Q9BUQ8 820 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 DNAJC25Q9H1X3 360 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 OGFRQ9NZT2 677 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 FNIP2Q9P278 1114 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 ORC3Q9UBD5 711 aaPredicted RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 FBXO4Q9UKT5 387 aa12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
RPUSD4-203ENST00000526942 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 KANSL1LA0AUZ9 987 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 CPLX1O14810 134 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 LAMTOR5O43504 91 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 ZMYND10O75800 440 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 FSHRP23945 695 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 CYP3A7P24462 503 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 ME1P48163 572 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 ZNF75DP51815 510 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 IQCB1Q15051 598 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 NTRK3Q16288 839 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 PARM1Q6UWI2 310 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 GPR65Q8IYL9 337 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 ZNF579Q8NAF0 562 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 LINC00301Q8NCQ3 95 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 ZFP42Q96MM3 310 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 MBOAT7Q96N66 472 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 EIF2AQ9BY44 585 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 RNF26Q9BY78 433 aaPredicted RBP12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 BCO2Q9BYV7 579 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 GPR62Q9BZJ7 368 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 MIOSQ9NXC5 875 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 MIA3Q5JRA6 1907 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 CACNA1IQ9P0X4 2223 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 PATJQ8NI35 1801 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 ZFHX4Q86UP3 3567 aa12.87□□□□□ -0.35
RPUSD4-203ENST00000526942 CDKL5O76039 1030 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 GUCY1B3Q02153 619 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 GABPB1Q06547 395 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 LAMTOR4Q0VGL1 99 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 MLF2Q15773 248 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 USP41Q3LFD5 358 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 FMR1NBQ8N0W7 255 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 COLEC11Q9BWP8 271 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 SLC26A6Q9BXS9 759 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 CDH7Q9ULB5 785 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 PCDHA7Q9UN72 937 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 HES2Q9Y543 173 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 PCDHGA2Q9Y5H1 932 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 MTCL1Q9Y4B5 1905 aaKnown RBP12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 EML1O00423 815 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 TSPAN1O60635 241 aa12.86□□□□□ -0.35
RPUSD4-203ENST00000526942 ERLIN2O94905 339 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms