RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 FAM49AQ9H0Q0 323 aaPredicted RBP14.39□□□□□ -0.11
LRRK1-202ENST00000525284 C14orf93Q9H972 538 aaKnown RBP14.39□□□□□ -0.11
LRRK1-202ENST00000525284 DYRK4Q9NR20 520 aa14.39□□□□□ -0.11
LRRK1-202ENST00000525284 CTCFP49711 727 aaPredicted RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 HSPA2P54652 639 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 POTEAQ6S8J7 498 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 STX12Q86Y82 276 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 TMEM35BQ8NCS4 154 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 MCRS1Q96EZ8 462 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 ELMO2Q96JJ3 720 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 CLMNQ96JQ2 1002 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 BCL2L14Q9BZR8 327 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 CD109Q6YHK3 1445 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 K7ERI5 159 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 TEX28O15482 410 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 IL12RB1P42701 662 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 BCAMP50895 628 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 PEX3P56589 373 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 CSNK2BP67870 215 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 ZSWIM7Q19AV6 140 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 ZNF790Q6PG37 636 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 RNASE11Q8TAA1 199 aaKnown RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 WDR17Q8IZU2 1322 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 FANCAO15360 1455 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 M0QYV0 167 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 CCND1P24385 295 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 SDC4P31431 198 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 NFX1Q12986 1120 aaKnown RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 ATP1A4Q13733 1029 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 DCPSQ96C86 337 aaKnown RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 PAGE5Q96GU1 130 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 FRMD6Q96NE9 622 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 RANBP17Q9H2T7 1088 aaKnown RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 CDYLQ9Y232 598 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 SSTR3P32745 418 aaPredicted RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 ABCD1P33897 745 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 DHX35Q9H5Z1 703 aaKnown RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 PPIP5K1Q6PFW1 1433 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 IQCA1LA6NCM1 817 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 PEX1O43933 1283 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 CDC40O60508 579 aaKnown RBP eCLIP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 MFN2O95140 757 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 BCAR1P56945 870 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 SESN2P58004 480 aaPredicted RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 LAMB3Q13751 1172 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 PGBD4Q96DM1 585 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 SERHL2Q9H4I8 314 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 NOL6Q9H6R4 1146 aaKnown RBP14.38□□□□□ -0.11
LRRK1-202ENST00000525284 SERHLQ9NQF3 203 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 POLR3EQ9NVU0 708 aa14.38□□□□□ -0.11
LRRK1-202ENST00000525284 DNMT1P26358 1616 aaKnown RBP14.37□□□□□ -0.11
LRRK1-202ENST00000525284 TPST1O60507 370 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ATP1A3P13637 1013 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 CHN1P15882 459 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PID1Q7Z2X4 250 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 LRRC49Q8IUZ0 686 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 CDKL3Q8IVW4 592 aaPredicted RBP14.37□□□□□ -0.11
LRRK1-202ENST00000525284 WNK4Q96J92 1243 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 CARD14Q9BXL6 1004 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 SLC9A2Q9UBY0 812 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PHF20L1A8MW92 1017 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 B2RBV5 119 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PSAPP07602 524 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PLA2G4AP47712 749 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ARSEP51690 589 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 FUT11Q495W5 492 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ARMC3Q5W041 872 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PDXDC2PQ6P474 469 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 COA7Q96BR5 231 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 HDAC6Q9UBN7 1215 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 DAPK2Q9UIK4 370 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 TRIM66O15016 1216 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 CALB1P05937 261 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ZNF235Q14590 738 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PKP3Q9Y446 797 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ASNA1O43681 348 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 HSMCR30P0CW71 290 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ZNF699Q32M78 642 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 DGKHQ86XP1 1220 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 FAM45AQ8TCE6 357 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ERP27Q96DN0 273 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 REXO4Q9GZR2 422 aaKnown RBP14.37□□□□□ -0.11
LRRK1-202ENST00000525284 AP4S1Q9Y587 144 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ABCC4O15439 1325 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 GTF2H3Q13889 308 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ARMC4Q5T2S8 1044 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 DDI2Q5TDH0 399 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 UBASH3BQ8TF42 649 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PIGSQ96S52 555 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 PDCD10Q9BUL8 212 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 EPN3Q9H201 632 aa14.37□□□□□ -0.11
LRRK1-202ENST00000525284 HERC5Q9UII4 1024 aaKnown RBP14.37□□□□□ -0.11
LRRK1-202ENST00000525284 ALDH1B1P30837 517 aa14.36□□□□□ -0.11
LRRK1-202ENST00000525284 CPA2P48052 419 aa14.36□□□□□ -0.11
LRRK1-202ENST00000525284 RFX3P48380 749 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms