RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 YARSP54577 528 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 KIAA0319Q5VV43 1072 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 KIAA1841Q6NSI8 718 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 ADHFE1Q8IWW8 467 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 PDILTQ8N807 584 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 ACAP3Q96P50 834 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 EMILIN2Q9BXX0 1053 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 HAPLN2Q9GZV7 340 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 EPHX3Q9H6B9 360 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 PARVGQ9HBI0 331 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 GOLGA2P5Q9HBQ8 144 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 STK17AQ9UEE5 414 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 STK39Q9UEW8 545 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 TTC28Q96AY4 2481 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 SMIM28A0A1B0GU29 152 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 H0YCG3 227 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 MEFVO15553 781 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 TOM1L1O75674 476 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 WEE2P0C1S8 567 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 STAT6P42226 847 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 ZC2HC1CQ53FD0 456 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 RARS2Q5T160 578 aaKnown RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 ZPBP2Q6X784 338 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 CCDC73Q6ZRK6 1079 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 SV2BQ7L1I2 683 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 GLYCTKQ8IVS8 523 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 FEZF2Q8TBJ5 459 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 RIN2Q8WYP3 895 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 DDX12PQ92771 950 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 ZMAT2Q96NC0 199 aaKnown RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 PPP1R10Q96QC0 940 aaKnown RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 TOPORSQ9NS56 1045 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 PRKAG3Q9UGI9 489 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 TBX20Q9UMR3 447 aa14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 MORC2Q9Y6X9 1032 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-205ENST00000525079 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 TEX28O15482 410 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 CLDN3O15551 220 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 PPP6R2O75170 966 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 BRD1O95696 1058 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 SPATA31D3P0C874 917 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 HOXB8P17481 243 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 RPL17P18621 184 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 LIG4P49917 911 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 CLCN4P51793 760 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 CLCNKBP51801 687 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 DSG1Q02413 1049 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 SOX4Q06945 474 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 NOLC1Q14978 699 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 USP41Q3LFD5 358 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 FAM171A1Q5VUB5 890 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 PRSS55Q6UWB4 352 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 ALKAL1Q6UXT8 129 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 SPATA31D4Q6ZUB0 917 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 SFR1Q86XK3 245 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 CEP57Q86XR8 500 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 SUSD6Q92537 303 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 STAMQ92783 540 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 RPGRIP1Q96KN7 1286 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 SNX27Q96L92 541 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 FIZ1Q96SL8 496 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 IKZF4Q9H2S9 585 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 CHST7Q9NS84 486 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 TBC1D7Q9P0N9 293 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 SSX2IPQ9Y2D8 614 aa14.05□□□□□ -0.16
TRAPPC4-205ENST00000525079 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 YEATS4O95619 227 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 SP100P23497 879 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 TNFSF9P41273 254 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 DNM1Q05193 864 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 SPAG1Q07617 926 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 MCL1Q07820 350 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 SLC10A6Q3KNW5 377 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 XKR4Q5GH76 650 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 RTP2Q5QGT7 225 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 TMC5Q6UXY8 1006 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 PPFIBP1Q86W92 1011 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 PALB2Q86YC2 1186 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 TMEM130Q8N3G9 435 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 DNAJC19Q96DA6 116 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 FBXL18Q96ME1 805 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 RXFP1Q9HBX9 757 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 SF3B1O75533 1304 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■■■■ 137.9
TRAPPC4-205ENST00000525079 PLXNA3P51805 1871 aa14.04□□□□□ -0.16
TRAPPC4-205ENST00000525079 TISP43B9A030 160 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 ANKRD63C9JTQ0 380 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 I3L4J1 428 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 HNRNPDLO14979 420 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 CUTAO60888 179 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 B3GAT3O94766 335 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 CXCL8P10145 99 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 IDEP14735 1019 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 BRCC3P46736 316 aa14.03□□□□□ -0.16
TRAPPC4-205ENST00000525079 GTF2BQ00403 316 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms