RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 KRT18P05783 430 aaKnown RBP20.34■□□□□ 0.85
CAPN1-203ENST00000525013 MAPTP10636 758 aaKnown RBP20.34■□□□□ 0.85
CAPN1-203ENST00000525013 MCF2P10911 925 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 MARCKSP29966 332 aaPredicted RBP20.34■□□□□ 0.85
CAPN1-203ENST00000525013 GRM5P41594 1212 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 RESTQ13127 1097 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 NAB2Q15742 525 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 FAM171A1Q5VUB5 890 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 FAM173BQ6P4H8 233 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 ELMSAN1Q6PJG2 1045 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 MPZL3Q6UWV2 235 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 CEP57Q86XR8 500 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 PALB2Q86YC2 1186 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 TMEM161BQ8NDZ6 487 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.34■□□□□ 0.85
CAPN1-203ENST00000525013 LARSQ9P2J5 1176 aaKnown RBP20.34■□□□□ 0.85
CAPN1-203ENST00000525013 ANKFY1Q9P2R3 1169 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 SPATA31D3P0C874 917 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 RPL17P18621 184 aaKnown RBP20.33■□□□□ 0.85
CAPN1-203ENST00000525013 MCM6Q14566 821 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 SPECC1Q5M775 1068 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 PRSS55Q6UWB4 352 aaPredicted RBP20.33■□□□□ 0.85
CAPN1-203ENST00000525013 SPATA31D4Q6ZUB0 917 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 GPR149Q86SP6 731 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 FEZF2Q8TBJ5 459 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 LRRC15Q8TF66 581 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 RAD54LQ92698 747 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 EDAQ92838 391 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 ZBTB45Q96K62 511 aaPredicted RBP20.33■□□□□ 0.85
CAPN1-203ENST00000525013 ACAP3Q96P50 834 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 PPP1R10Q96QC0 940 aaKnown RBP20.33■□□□□ 0.85
CAPN1-203ENST00000525013 REEP2Q9BRK0 252 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 TTPALQ9BTX7 342 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 ZHX3Q9H4I2 956 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 BLOC1S4Q9NUP1 217 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 DPP7Q9UHL4 492 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 HCN4Q9Y3Q4 1203 aa20.33■□□□□ 0.85
CAPN1-203ENST00000525013 SMIM28A0A1B0GU29 152 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 H0YCG3 227 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 FAM13AO94988 1023 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 PROZP22891 400 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 MATR3P43243 847 aaKnown RBP eCLIP20.32■□□□□ 0.84
CAPN1-203ENST00000525013 CREMQ03060 361 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 PTPAQ15257 358 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 RTP2Q5QGT7 225 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 GPR65Q8IYL9 337 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 MYCT1Q8N699 235 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 BICD1Q96G01 975 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 EPSTI1Q96J88 318 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 CCSER1Q9C0I3 900 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 FNIP2Q9P278 1114 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 ODF2LQ9ULJ1 636 aa20.32■□□□□ 0.84
CAPN1-203ENST00000525013 VWA8A3KMH1 1905 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 C2CD4DB7Z1M9 353 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 TOM1L1O75674 476 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 B3GAT3O94766 335 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 CLCNKBP51801 687 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 ZXDAP98168 799 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 ELAVL2Q12926 359 aaKnown RBP20.31■□□□□ 0.84
CAPN1-203ENST00000525013 NOLC1Q14978 699 aaKnown RBP eCLIP20.31■□□□□ 0.84
CAPN1-203ENST00000525013 USP49Q70CQ1 688 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 HAUS6Q7Z4H7 955 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 GOLGA2P5Q9HBQ8 144 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
CAPN1-203ENST00000525013 CCDC195A0A1B0GUA6 201 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 ABLIM1O14639 778 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 CLDN3O15551 220 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 STX6O43752 255 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 TBCAO75347 108 aaKnown RBP20.3■□□□□ 0.84
CAPN1-203ENST00000525013 NCKAP1LP55160 1127 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 PSMD5Q16401 504 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 SEZ6Q53EL9 994 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 DCLRE1AQ6PJP8 1040 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 ALKAL1Q6UXT8 129 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 ZPBP2Q6X784 338 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 TDRD5Q8NAT2 981 aaKnown RBP20.3■□□□□ 0.84
CAPN1-203ENST00000525013 LARP4BQ92615 738 aaKnown RBP20.3■□□□□ 0.84
CAPN1-203ENST00000525013 SNX27Q96L92 541 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 UROC1Q96N76 676 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 PARVGQ9HBI0 331 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 SLC38A7Q9NVC3 462 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 CCDC39Q9UFE4 941 aa20.3■□□□□ 0.84
CAPN1-203ENST00000525013 FBXO2Q9UK22 296 aaPredicted RBP20.3■□□□□ 0.84
CAPN1-203ENST00000525013 SRPRBQ9Y5M8 271 aaKnown RBP20.3■□□□□ 0.84
CAPN1-203ENST00000525013 ZDBF2Q9HCK1 2354 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 DENND4AQ7Z401 1863 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 K7ENM7 598 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 TGM5O43548 720 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 RFPL2O75678 378 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 BRD1O95696 1058 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 DDIT3P35638 169 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 PTPN21Q16825 1174 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 UPP1Q16831 310 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 C15orf39Q6ZRI6 1047 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 TRIM67Q6ZTA4 783 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 CCDC149Q6ZUS6 474 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 HFE2Q6ZVN8 426 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 CMASQ8NFW8 434 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-203ENST00000525013 PIK3R5Q8WYR1 880 aa20.29■□□□□ 0.84
CAPN1-203ENST00000525013 CLIC6Q96NY7 704 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms