RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 CENPPQ6IPU0 288 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 OTOP3Q7RTS5 596 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 APTXQ7Z2E3 356 aaKnown RBP11.91□□□□□ -0.5
MRPS28-208ENST00000521605 CCDC186Q7Z3E2 898 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 ABI1Q8IZP0 508 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 LRRC43Q8N309 656 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 SYT2Q8N9I0 419 aaPredicted RBP11.91□□□□□ -0.5
MRPS28-208ENST00000521605 SUMF1Q8NBK3 374 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 RNF169Q8NCN4 708 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 CCDC112Q8NEF3 446 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 TMEM40Q8WWA1 233 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 NELFBQ8WX92 580 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 DNAJC19Q96DA6 116 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 TMEM117Q9H0C3 514 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 JADE2Q9NQC1 790 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 TBC1D22BQ9NU19 505 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 SPTLC3Q9NUV7 552 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 TMEM161AQ9NX61 479 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 CDV3Q9UKY7 258 aaKnown RBP11.91□□□□□ -0.5
MRPS28-208ENST00000521605 DNM3Q9UQ16 869 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 DENND4AQ7Z401 1863 aa11.91□□□□□ -0.5
MRPS28-208ENST00000521605 NT5C1B-RDH14C9J2C7 533 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 FGFR1OPO95684 399 aaKnown RBP11.9□□□□□ -0.5
MRPS28-208ENST00000521605 PLA2G4BP0C869 781 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 KCNA2P16389 499 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 LRCH2Q5VUJ6 765 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 TTI2Q6NXR4 508 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 C1orf210Q8IVY1 113 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 FAM114A1Q8IWE2 563 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 CCDC65Q8IXS2 484 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 KIAA1524Q8TCG1 905 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 GPRASP2Q96D09 838 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 IQCDQ96DY2 449 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 CDHR1Q96JP9 859 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 CASD1Q96PB1 797 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 TEKT3Q9BXF9 490 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 AZI2Q9H6S1 392 aa11.9□□□□□ -0.5
MRPS28-208ENST00000521605 USP24Q9UPU5 2620 aa11.9□□□□□ -0.51
MRPS28-208ENST00000521605 CHD8Q9HCK8 2581 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
MRPS28-208ENST00000521605 SMIM35A0A1B0GVV1 85 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
MRPS28-208ENST00000521605 GPR182O15218 404 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 GAS7O60861 476 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 MED24O75448 989 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
MRPS28-208ENST00000521605 SDHBP21912 280 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 CASP1P29466 404 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 PBX1P40424 430 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 TBX2Q13207 712 aaPredicted RBP11.89□□□□□ -0.51
MRPS28-208ENST00000521605 MCM6Q14566 821 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 BMS1Q14692 1282 aaKnown RBP11.89□□□□□ -0.51
MRPS28-208ENST00000521605 ECM1Q16610 540 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
MRPS28-208ENST00000521605 SPECC1LQ69YQ0 1117 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 SLC39A11Q8N1S5 342 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 NME8Q8N427 588 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 DDX12PQ92771 950 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 STAMQ92783 540 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 PCYT2Q99447 389 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 ZNF577Q9BSK1 485 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 KCNF1Q9H3M0 494 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
MRPS28-208ENST00000521605 WNT16Q9UBV4 365 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 SIT1Q9Y3P8 196 aa11.89□□□□□ -0.51
MRPS28-208ENST00000521605 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 ADRB1P08588 477 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 GAP43P17677 238 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 ITGB5P18084 799 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 CYP11B2P19099 503 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 SFNP31947 248 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 GBP2P32456 591 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-208ENST00000521605 STK4Q13043 487 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 TRIM14Q14142 442 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 TPD52L1Q16890 204 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-208ENST00000521605 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 TCP11X2Q5H9J9 407 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 GPR149Q86SP6 731 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 VPS52Q8N1B4 723 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 KIAA0895Q8NCT3 520 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-208ENST00000521605 GPR152Q8TDT2 470 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 OSMRQ99650 979 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 EIF2AK1Q9BQI3 630 aaKnown RBP11.88□□□□□ -0.51
MRPS28-208ENST00000521605 TIPINQ9BVW5 301 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 ELAC1Q9H777 363 aaKnown RBP11.88□□□□□ -0.51
MRPS28-208ENST00000521605 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
MRPS28-208ENST00000521605 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms