RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 BCL7CQ8WUZ0 217 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-209ENST00000521167 LARP4BQ92615 738 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-209ENST00000521167 EPSTI1Q96J88 318 aa11.42□□□□□ -0.58
TRAPPC9-209ENST00000521167 NECAB3Q96P71 396 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-209ENST00000521167 KLK14Q9P0G3 267 aa11.42□□□□□ -0.58
TRAPPC9-209ENST00000521167 STK17AQ9UEE5 414 aa11.42□□□□□ -0.58
TRAPPC9-209ENST00000521167 USP20Q9Y2K6 914 aa11.42□□□□□ -0.58
TRAPPC9-209ENST00000521167 NPHP3-ACAD11A0A0J9YXS1 232 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 BHMG1C9JSJ3 638 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 CLASP2O75122 1294 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 PPP6R2O75170 966 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 RECQL4O94761 1208 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 FAM13AO94988 1023 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 BRD1O95696 1058 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 SOD2P04179 222 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 KRT18P05783 430 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 ZSCAN22P10073 491 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 MAPTP10636 758 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 MCF2P10911 925 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 HOXB8P17481 243 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 PROZP22891 400 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 GRM5P41594 1212 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 ZNF131P52739 623 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 NCKAP1LP55160 1127 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 TUSC3Q13454 348 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 DHX8Q14562 1220 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 E2F4Q16254 413 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 SPECC1Q5M775 1068 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 RRAGBQ5VZM2 374 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 ATL3Q6DD88 541 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 MPZL3Q6UWV2 235 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 ZPBP2Q6X784 338 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 USP49Q70CQ1 688 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 PPFIBP1Q86W92 1011 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 MYCT1Q8N699 235 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 TMEM87AQ8NBN3 555 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 LINC00301Q8NCQ3 95 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 VN1R2Q8NFZ6 395 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 LRRC15Q8TF66 581 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 CASP10Q92851 521 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 CLIC6Q96NY7 704 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 REEP2Q9BRK0 252 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 TCHPQ9BT92 498 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 HERC2P3Q9BVR0 1158 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 CCDC94Q9BW85 323 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 VN1R3Q9BXE9 311 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 PARVGQ9HBI0 331 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 MARCH5Q9NX47 278 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 XIRP2A4UGR9 3374 aa11.41□□□□□ -0.58
TRAPPC9-209ENST00000521167 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 ABLIM1O14639 778 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 PTGESO14684 152 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 SPTLC2O15270 562 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 LILRB3O75022 631 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 TOM1L1O75674 476 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 YEATS4O95619 227 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 F13A1P00488 732 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 YARSP54577 528 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 PTPN14Q15678 1187 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 NAB2Q15742 525 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 ZNF568Q3ZCX4 644 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 ANKRD54Q6NXT1 300 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 ALKAL1Q6UXT8 129 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 SV2BQ7L1I2 683 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 HAUS6Q7Z4H7 955 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 ADHFE1Q8IWW8 467 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 RNF168Q8IYW5 571 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 ACAP3Q96P50 834 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 EPAS1Q99814 870 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 EMILIN2Q9BXX0 1053 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 CDT1Q9H211 546 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 TOPORSQ9NS56 1045 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 TFIP11Q9UBB9 837 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 GDAQ9Y2T3 454 aa11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 PRG3Q9Y2Y8 225 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-209ENST00000521167 CLDN3O15551 220 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 TRAK2O60296 914 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 TBCAO75347 108 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 TADA2AO75478 443 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 C1RP00736 705 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 URODP06132 367 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 CA8P35219 290 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 DSG1Q02413 1049 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 HSP90AA2PQ14568 343 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 CLUL1Q15846 466 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 KYAT1Q16773 422 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 USP41Q3LFD5 358 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 XKR4Q5GH76 650 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 KIAA0319Q5VV43 1072 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 FUT10Q6P4F1 479 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 GJD3Q8N144 294 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 SLC22A17Q8WUG5 538 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 AUTS2Q8WXX7 1259 aa11.39□□□□□ -0.59
TRAPPC9-209ENST00000521167 UROC1Q96N76 676 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms