RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZMYM2Q9UBW7 1377 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 PLXNA3P51805 1871 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 VWA8A3KMH1 1905 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 SMIM28A0A1B0GU29 152 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 TOM1L1O75674 476 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 KIF4AO95239 1232 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 SOD2P04179 222 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 CASP5P51878 434 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 GTF2BQ00403 316 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 SPAG1Q07617 926 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 MCL1Q07820 350 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 TUSC3Q13454 348 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 NOLC1Q14978 699 aaKnown RBP eCLIP14.57□□□□□ -0.08
VEGFA-219ENST00000518824 SLC10A6Q3KNW5 377 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 XKR4Q5GH76 650 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 FUT10Q6P4F1 479 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 SYCE2Q6PIF2 218 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 ZPBP2Q6X784 338 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 KCNN1Q92952 543 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 PPP2R3CQ969Q6 453 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 C18orf25Q96B23 403 aaPredicted RBP14.57□□□□□ -0.08
VEGFA-219ENST00000518824 BICD1Q96G01 975 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 SNX27Q96L92 541 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 HERC2P3Q9BVR0 1158 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 CD207Q9UJ71 328 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 CUL9Q8IWT3 2517 aa14.57□□□□□ -0.08
VEGFA-219ENST00000518824 NCK2O43639 380 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 FAM189A1O60320 539 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 PPP1R37O75864 691 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 PIGRP01833 764 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 CNPP09543 421 aaKnown RBP14.56□□□□□ -0.08
VEGFA-219ENST00000518824 MYBP10242 640 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
VEGFA-219ENST00000518824 IDEP14735 1019 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 EPCAMP16422 314 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 ME1P48163 572 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 HSP90AA2PQ14568 343 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-219ENST00000518824 KIAA0319Q5VV43 1072 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 RESP18Q5W5W9 173 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 ZNF720Q7Z2F6 126 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 C12orf76Q8N812 135 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-219ENST00000518824 C3orf58Q8NDZ4 430 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 KCNG4Q8TDN1 519 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 SLC22A17Q8WUG5 538 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 LEO1Q8WVC0 666 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-219ENST00000518824 ACAP3Q96P50 834 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 KLHL5Q96PQ7 755 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 CDCA3Q99618 268 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-219ENST00000518824 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
VEGFA-219ENST00000518824 COLEC11Q9BWP8 271 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 STRA6Q9BX79 667 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 S1PR5Q9H228 398 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 ADAM28Q9UKQ2 775 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 IRAK3Q9Y616 596 aa14.56□□□□□ -0.08
VEGFA-219ENST00000518824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-219ENST00000518824 FRMD3A2A2Y4 597 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 I3L4J1 428 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 POLR2DO15514 142 aaKnown RBP14.55□□□□□ -0.08
VEGFA-219ENST00000518824 CLDN3O15551 220 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 CXCL8P10145 99 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 MATR3P43243 847 aaKnown RBP eCLIP14.55□□□□□ -0.08
VEGFA-219ENST00000518824 LIG4P49917 911 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 CLCNKBP51801 687 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 TPRNQ4KMQ1 711 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 ANKRD54Q6NXT1 300 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 PRSS55Q6UWB4 352 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-219ENST00000518824 TMEM184AQ6ZMB5 413 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 MAP4K3Q8IVH8 894 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 GRAMD1CQ8IYS0 662 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 SMRP1Q8NCR6 262 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 ZSWIM2Q8NEG5 633 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 GDPD2Q9HCC8 539 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 CHST7Q9NS84 486 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 KBTBD4Q9NVX7 518 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 ANK1P16157 1881 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 C5orf42Q9H799 3197 aa14.55□□□□□ -0.08
VEGFA-219ENST00000518824 A0A0B4J269 797 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 H0YCG3 227 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 HNRNPDLO14979 420 aaKnown RBP14.54□□□□□ -0.08
VEGFA-219ENST00000518824 TADA2AO75478 443 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 WEE2P0C1S8 567 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 RPL17P18621 184 aaKnown RBP14.54□□□□□ -0.08
VEGFA-219ENST00000518824 BRCC3P46736 316 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 GUCY2FP51841 1108 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 DSG1Q02413 1049 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 COASYQ13057 564 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 SMAD4Q13485 552 aaKnown RBP14.54□□□□□ -0.08
VEGFA-219ENST00000518824 SMAD2Q15796 467 aaKnown RBP14.54□□□□□ -0.08
VEGFA-219ENST00000518824 ENOX2Q16206 610 aaKnown RBP14.54□□□□□ -0.08
VEGFA-219ENST00000518824 RTP2Q5QGT7 225 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 ATL3Q6DD88 541 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 GLYCTKQ8IVS8 523 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 TRIM9Q9C026 710 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 BLZF1Q9H2G9 400 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 ST6GALNAC4Q9H4F1 302 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 MRPL44Q9H9J2 332 aaKnown RBP14.54□□□□□ -0.08
VEGFA-219ENST00000518824 PANK4Q9NVE7 773 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 CNTN3Q9P232 1028 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 TUBGCP4Q9UGJ1 667 aa14.54□□□□□ -0.08
VEGFA-219ENST00000518824 KCNG1Q9UIX4 513 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms