RNA–Protein interactions for RNA: ENST00000518806.1

DENND3-209, Transcript of DENN domain containing 3, human

TSL 3

Gene DENND3, Length 1,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-209	ENST00000518806	FBXO2	Q9UK22	296 aa	Predicted RBP	13.74	□□□□□ -0.21
DENND3-209	ENST00000518806	RBM19	Q9Y4C8	960 aa	Known RBP	13.74	□□□□□ -0.21
DENND3-209	ENST00000518806	SMIM28	A0A1B0GU29	152 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806		I3L4J1	428 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	RFPL2	O75678	378 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	BMP15	O95972	392 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	PROZ	P22891	400 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	GRM5	P41594	1212 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	CLCNKB	P51801	687 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	SOX4	Q06945	474 aa	Predicted RBP	13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	STRN3	Q13033	797 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	USP41	Q3LFD5	358 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	FAM171A1	Q5VUB5	890 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	PPFIBP1	Q86W92	1011 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	SPRYD3	Q8NCJ5	442 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	C18orf25	Q96B23	403 aa	Predicted RBP	13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	INTS4	Q96HW7	963 aa	Known RBP	13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	PPP1R10	Q96QC0	940 aa	Known RBP	13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	USP28	Q96RU2	1077 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	TIPIN	Q9BVW5	301 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	CCDC94	Q9BW85	323 aa	Predicted RBP	13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	RXFP1	Q9HBX9	757 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	STK39	Q9UEW8	545 aa		13.73	□□□□□ -0.21
DENND3-209	ENST00000518806	ZMYM2	Q9UBW7	1377 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	ADAM12	O43184	909 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	TGM5	O43548	720 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	STX6	O43752	255 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	GLUD1	P00367	558 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	KRT18	P05783	430 aa	Known RBP	13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	ADH1A	P07327	375 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	MTHFR	P42898	656 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	MATR3	P43243	847 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	SMTN	P53814	917 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	YARS	P54577	528 aa	Known RBP	13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	ATAT1	Q5SQI0	421 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	MPZL3	Q6UWV2	235 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	CD300LG	Q6UXG3	332 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	HFE2	Q6ZVN8	426 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	HAUS6	Q7Z4H7	955 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	MYCT1	Q8N699	235 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	C3orf58	Q8NDZ4	430 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	BICD1	Q96G01	975 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	SNX27	Q96L92	541 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	RIPOR3	Q96MK2	946 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	NTPCR	Q9BSD7	190 aa	Known RBP	13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	PANK2	Q9BZ23	570 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	SMOC2	Q9H3U7	446 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	SFXN1	Q9H9B4	322 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	C17orf75	Q9HAS0	396 aa		13.72	□□□□□ -0.21
DENND3-209	ENST00000518806	CCDC195	A0A1B0GUA6	201 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	PRR33	A8MZF0	331 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806		K7ENM7	598 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	B3GAT3	O94766	335 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	FAM13A	O94988	1023 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	ASGR2	P07307	311 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	MCF2	P10911	925 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	NMT1	P30419	496 aa	Known RBP	13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	BRCC3	P46736	316 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	NCKAP1L	P55160	1127 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	SPAG1	Q07617	926 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	ZBTB41	Q5SVQ8	909 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	ALKAL1	Q6UXT8	129 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	DYM	Q7RTS9	669 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	GPR149	Q86SP6	731 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	LARP4B	Q92615	738 aa	Known RBP	13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	EDA	Q92838	391 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	ACAP3	Q96P50	834 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	TTPAL	Q9BTX7	342 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	IKZF4	Q9H2S9	585 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	KCND2	Q9NZV8	630 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	LARS	Q9P2J5	1176 aa	Known RBP	13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	TFIP11	Q9UBB9	837 aa	Known RBP	13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	SSX2IP	Q9Y2D8	614 aa		13.71	□□□□□ -0.21
DENND3-209	ENST00000518806	SRPRB	Q9Y5M8	271 aa	Known RBP	13.71	□□□□□ -0.21
DENND3-209	ENST00000518806		A0A087X0B3	334 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	TISP43	B9A030	160 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	TOM1L1	O75674	476 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	BRD1	O95696	1058 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	TKT	P29401	623 aa	Known RBP	13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	DDIT3	P35638	169 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	TNFSF9	P41273	254 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	ZXDA	P98168	799 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	UPP1	Q16831	310 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	XKR4	Q5GH76	650 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	KCTD17	Q8N5Z5	321 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	LNX1	Q8TBB1	728 aa	Predicted RBP	13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	NECTIN4	Q96NY8	510 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	FIZ1	Q96SL8	496 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	CLSTN3	Q9BQT9	956 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	CCSER1	Q9C0I3	900 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	LIMD1	Q9UGP4	676 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	ODF2L	Q9ULJ1	636 aa		13.7	□□□□□ -0.22
DENND3-209	ENST00000518806	NR2E1	Q9Y466	385 aa		13.7	□□□□□ -0.22

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