RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 C10orf25Q5T742 122 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PRAMEF17Q5VTA0 474 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KIAA0895LQ68EN5 471 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PLEKHA7Q6IQ23 1121 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LRSAM1Q6UWE0 723 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FAM198BQ6UWH4 519 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MEX3BQ6ZN04 569 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 RAPH1Q70E73 1250 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PIP4P1Q86T03 277 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 RBM23Q86U06 439 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CMTM4Q8IZR5 234 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 OR10H5Q8NGA6 315 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 WDR48Q8TAF3 677 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LMO3Q8TAP4 145 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 UHMK1Q8TAS1 419 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 NPLOC4Q8TAT6 608 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 DIO2Q92813 273 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 GFM2Q969S9 779 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 INPP4AQ96PE3 977 aaPredicted RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 HAPLN3Q96S86 360 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 NEU1Q99519 415 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MOV10L1Q9BXT6 1211 aaKnown RBP0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MTFR1LQ9H019 292 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 OR10A5Q9H207 317 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 EPC1Q9H2F5 836 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 RMI1Q9H9A7 625 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PCDHB6Q9Y5E3 794 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PCDHA2Q9Y5H9 948 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 NOX1Q9Y5S8 564 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 TEX15Q9BXT5 2789 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 GPR179Q6PRD1 2367 aa0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LAMA2P24043 3122 aaKnown RBP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 F6X3S4 739 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ARNTLO00327 626 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ADAMTS3O15072 1205 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ZNF500O60304 480 aaPredicted RBP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 APOHP02749 345 aaPredicted RBP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PF4P02776 101 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ELANEP08246 267 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ECE1P42892 770 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CRKP46108 304 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FXR1P51114 621 aaKnown RBP eCLIP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ERVFC1-1P60608 527 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LMNB2Q03252 620 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KCNAB2Q13303 367 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ITPR2Q14571 2701 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CCDC6Q16204 474 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FAM102AQ5T9C2 384 aaPredicted RBP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 B3GNTL1Q67FW5 361 aaPredicted RBP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 NADSYN1Q6IA69 706 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 IQCEQ6IPM2 695 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CATSPERGQ6ZRH7 1159 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 DOK3Q7L591 496 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 THNSL2Q86YJ6 484 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 NAV3Q8IVL0 2385 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 UNC80Q8N2C7 3258 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 LNX2Q8N448 690 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 RCBTB1Q8NDN9 531 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ZNF548Q8NEK5 533 aaPredicted RBP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 TFAP2BQ92481 460 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 NEUROG1Q92886 237 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 RNF34Q969K3 372 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SNX27Q96L92 541 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 C5orf34Q96MH7 638 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 JAM3Q9BX67 310 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CDIP1Q9H305 208 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 BRMS1Q9HCU9 246 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CD93Q9NPY3 652 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CCDC177Q9NQR7 707 aaPredicted RBP0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KLHL13Q9P2N7 655 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 HDAC5Q9UQL6 1122 aa0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SRRM2Q9UQ35 2752 aaKnown RBP-0□□□□□ -2.41
SCARNA21.1-201ENST00000515996 CSMD1Q96PZ7 3565 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 FLNBO75369 2602 aaKnown RBP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MEIS3P2A8K0S8 358 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PRR5-ARHGAP8B1AHC4 643 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 H3BRB1 525 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 GCOM1H8Y6P7 765 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SMIM22K7EJ46 135 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 YY2O15391 372 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 TLR3O15455 904 aaKnown RBP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ICMTO60725 284 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 DNAJB5O75953 348 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MPIG6BO95866 241 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 HNRNPCP07910 306 aaKnown RBP eCLIP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 PIM1P11309 404 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 RLBP1P12271 317 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KRTAP10-10P60014 251 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KRTAP12-4P60329 112 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 IRX6P78412 446 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 DLK1P80370 383 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 POU5F1BQ06416 359 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 SRSF1Q07955 248 aaKnown RBP eCLIP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ZNF268Q14587 947 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 UBXN2BQ14CS0 331 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 ZNF718Q3SXZ3 478 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KIAA1211LQ6NV74 962 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 MIS18BP1Q6P0N0 1132 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 KCTD1Q719H9 257 aa-0.01□□□□□ -2.41
SCARNA21.1-201ENST00000515996 XYLT1Q86Y38 959 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms