RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 HOXA6P31267 233 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CIITAP33076 1130 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SREBF1P36956 1147 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 BRCC3P46736 316 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CXCL12P48061 93 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SCNN1GP51170 649 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CDR1P51861 262 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 EPHA5P54756 1037 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 AK2P54819 239 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NPEPPSP55786 919 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CLDN6P56747 220 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KRT17Q04695 432 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PRKCQQ04759 706 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TNK2Q07912 1038 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF252P-AS1Q0IIN9 211 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SCAPQ12770 1279 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SEMA3BQ13214 749 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MTMR1Q13613 665 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RAB33AQ14088 237 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SIM2Q14190 667 aaPredicted RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MRPL58Q14197 206 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NTRK3Q16288 839 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CCDC142Q17RM4 750 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CEP55Q53EZ4 464 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HSP90AB4PQ58FF6 505 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 EARS2Q5JPH6 523 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF484Q5JVG2 852 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZBTB41Q5SVQ8 909 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SPOUT1Q5T280 376 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SH3PXD2AQ5TCZ1 1133 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 EEF1DP3Q658K8 133 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PLA2G4FQ68DD2 849 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HIST2H2BCQ6DN03 193 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FUT10Q6P4F1 479 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CWC27Q6UX04 472 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TMEM92Q6UXU6 159 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PRR23BQ6ZRT6 265 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MFSD6Q6ZSS7 791 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ANO5Q75V66 913 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GAREM2Q75VX8 874 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TRMT1LQ7Z2T5 733 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TMEM150AQ86TG1 271 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 WDR5BQ86VZ2 330 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 AMOTL1Q8IY63 956 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF654Q8IZM8 581 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MIER1Q8N108 512 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF843Q8N446 348 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SAMD3Q8N6K7 520 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TTC9BQ8N6N2 239 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CELF5Q8N6W0 485 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PNPLA1Q8N8W4 532 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RNF169Q8NCN4 708 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DEFB124Q8NES8 71 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 OLIG1Q8TAK6 271 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TTC8Q8TAM2 541 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SHKBP1Q8TBC3 707 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ASAP3Q8TDY4 903 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HASPINQ8TF76 798 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HDAC7Q8WUI4 952 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HNRNPLLQ8WVV9 542 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ATRIPQ8WXE1 791 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZCCHC14Q8WYQ9 949 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 BSNDQ8WZ55 320 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SLC5A5Q92911 643 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PPP2R3CQ969Q6 453 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NXPE3Q969Y0 559 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ELSPBP1Q96BH3 223 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ACSF2Q96CM8 615 aaPredicted RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DDX27Q96GQ7 796 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TMEM169Q96HH4 297 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CPB2Q96IY4 423 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZMAT2Q96NC0 199 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ASB16Q96NS5 453 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FNBP1Q96RU3 617 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HINFPQ9BQA5 517 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TMEM175Q9BSA9 504 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 POLR3CQ9BUI4 534 aaPredicted RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SPZ1Q9BXG8 430 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NIFKQ9BYG3 293 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LRRC2Q9BYS8 371 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TRIM9Q9C026 710 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HAPLN2Q9GZV7 340 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GBP3Q9H0R5 595 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 UNC45AQ9H3U1 944 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NXF3Q9H4D5 531 aaKnown RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PRORYQ9H606 182 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KAT14Q9H8E8 782 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 IL21Q9HBE4 155 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GOLGA2P5Q9HBQ8 144 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 POLD4Q9HCU8 107 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 JPH1Q9HDC5 661 aaPredicted RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZDHHC4Q9NPG8 344 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CD93Q9NPY3 652 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TRPV5Q9NQA5 729 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HPS4Q9NQG7 708 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 AVENQ9NQS1 362 aaPredicted RBP1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF302Q9NR11 478 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TOMM22Q9NS69 142 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GJB4Q9NTQ9 266 aa1.34□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 AGPAT5Q9NUQ2 364 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms