RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TRAPPC12Q8WVT3 735 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 UBXN4Q92575 508 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 RABGGTAQ92696 567 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 MAP7D2Q96T17 732 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
RNF4-220ENST00000513578 ISCUQ9H1K1 167 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 IFT122Q9HBG6 1241 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 RNF14Q9UBS8 474 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 SALL4Q9UJQ4 1053 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 ZHX1Q9UKY1 873 aaPredicted RBP9.03□□□□□ -0.96
RNF4-220ENST00000513578 TFR2Q9UP52 801 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 CNTN6Q9UQ52 1028 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 CAPN6Q9Y6Q1 641 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 NRCAMQ92823 1304 aa9.03□□□□□ -0.96
RNF4-220ENST00000513578 TRIP12Q14669 1992 aaPredicted RBP9.03□□□□□ -0.96
RNF4-220ENST00000513578 SMIM35A0A1B0GVV1 85 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 MACROD2A1Z1Q3 448 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 MBLAC1A4D2B0 266 aaPredicted RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 CES2O00748 559 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 ADCY6O43306 1168 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 B4GALT4O60513 344 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 KPNA6O60684 536 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 IL18RAPO95256 599 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 MOCS3O95396 460 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 VNN1O95497 513 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 HLA-DRAP01903 254 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 ATP1A1P05023 1023 aaKnown RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 TUBBP07437 444 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 DLATP10515 647 aaKnown RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 TNNI1P19237 187 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 TBXAS1P24557 533 aaPredicted RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 ACOT2P49753 483 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 CPT1AP50416 773 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 CLCN3P51790 818 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 BPIFB4P59827 614 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 CKAP4Q07065 602 aaKnown RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 PPFIA1Q13136 1202 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 GRIK4Q16099 956 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 AMHR2Q16671 573 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 WDR44Q5JSH3 913 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 MARCH8Q5T0T0 291 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 ATF7IP2Q5U623 682 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 TDRD10Q5VZ19 366 aaKnown RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 SLFN11Q7Z7L1 901 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 PPM1KQ8N3J5 372 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 GPR161Q8N6U8 529 aaKnown RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 SMC1BQ8NDV3 1235 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 EPS8L1Q8TE68 723 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 LMBR1Q8WVP7 490 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 GOLGA1Q92805 767 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 PRDM10Q9NQV6 1147 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 TOPORSQ9NS56 1045 aaPredicted RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 C1orf112Q9NSG2 853 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 FLRT1Q9NZU1 646 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 ANKFY1Q9P2R3 1169 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 NOCTQ9UK39 431 aaKnown RBP9.02□□□□□ -0.97
RNF4-220ENST00000513578 SNX12Q9UMY4 172 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 HYOU1Q9Y4L1 999 aa9.02□□□□□ -0.97
RNF4-220ENST00000513578 SCN10AQ9Y5Y9 1956 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 CTAGE15A4D2H0 777 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 ANKRD62A6NC57 917 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 TMEM88BA6NKF7 163 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 TTLL13PA6NNM8 815 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 INO80B-WBP1J3KQ70 363 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 TNPO2O14787 897 aaKnown RBP9.01□□□□□ -0.97
RNF4-220ENST00000513578 DYNC1LI2O43237 492 aaPredicted RBP9.01□□□□□ -0.97
RNF4-220ENST00000513578 RTN2O75298 545 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 LRRN2O75325 713 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 MTA2O94776 668 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 CLTAP09496 248 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 ZNF286BP0CG31 522 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 CTAGE8P0CG41 777 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 CHRNB2P17787 502 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 HOXC8P31273 242 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 MATR3P43243 847 aaKnown RBP eCLIP9.01□□□□□ -0.97
RNF4-220ENST00000513578 GALCP54803 685 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 WNT7BP56706 349 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 ADAM17P78536 824 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 CRHR2Q13324 411 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 ZBTB41Q5SVQ8 909 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 MEI1Q5TIA1 1274 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 PPP1R2P3Q6NXS1 205 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 TLK2Q86UE8 772 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 CTAGE6Q86UF2 777 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 NT5DC4Q86YG4 428 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 GLYCTKQ8IVS8 523 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 CTAGE4Q8IX94 777 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 KIAA0319LQ8IZA0 1049 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 SYCE1Q8N0S2 351 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 METTL13Q8N6R0 699 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 UBR7Q8N806 425 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 U2AF1L4Q8WU68 220 aaKnown RBP9.01□□□□□ -0.97
RNF4-220ENST00000513578 TAF4BQ92750 862 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 KAT2BQ92831 832 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 TATDN2Q93075 761 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 NLRP4Q96MN2 994 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 TCHPQ9BT92 498 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 PACSIN1Q9BY11 444 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 INO80BQ9C086 356 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms