RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 CDCA2Q69YH5 1023 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-212ENST00000513538 CD300LGQ6UXG3 332 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 MAEAQ7L5Y9 396 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 DGLUCYQ7Z3D6 616 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 HACE1Q8IYU2 909 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 NAP1L4Q99733 375 aaKnown RBP10.68□□□□□ -0.7
TCOF1-212ENST00000513538 KXD1Q9BQD3 176 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 FZD8Q9H461 694 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 PDZD7Q9H5P4 517 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 TTC12Q9H892 705 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-212ENST00000513538 SNTG2Q9NY99 539 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 DLL3Q9NYJ7 618 aa10.68□□□□□ -0.7
TCOF1-212ENST00000513538 ZFP37Q9Y6Q3 630 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-212ENST00000513538 DNAH14Q0VDD8 3507 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 KANSL1LA0AUZ9 987 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 EPB41L2O43491 1005 aaKnown RBP10.67□□□□□ -0.7
TCOF1-212ENST00000513538 CDKL5O76039 1030 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 BAG4O95429 457 aaKnown RBP10.67□□□□□ -0.7
TCOF1-212ENST00000513538 LARGE1O95461 756 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 HNRNPA1P09651 372 aaKnown RBP eCLIP10.67□□□□□ -0.7
TCOF1-212ENST00000513538 SPATA31C1P0DKV0 1188 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 CD72P21854 359 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 HOXA9P31269 272 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 NCBP1Q09161 790 aaKnown RBP10.67□□□□□ -0.7
TCOF1-212ENST00000513538 MLF2Q15773 248 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-212ENST00000513538 CALCRLQ16602 461 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 FAM187BQ17R55 369 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 PPM1LQ5SGD2 360 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 CEP57Q86XR8 500 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 NOSTRINQ8IVI9 506 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 C3orf58Q8NDZ4 430 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 SLC7A14Q8TBB6 771 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 ING5Q8WYH8 240 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 RUBCNQ92622 972 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 MTMR9Q96QG7 549 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 HINFPQ9BQA5 517 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 CCDC113Q9H0I3 377 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 TMEM60Q9H2L4 133 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 DNMT3BQ9UBC3 853 aaKnown RBP10.67□□□□□ -0.7
TCOF1-212ENST00000513538 ORC3Q9UBD5 711 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-212ENST00000513538 PCDHA12Q9UN75 941 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 POLIQ9UNA4 740 aa10.67□□□□□ -0.7
TCOF1-212ENST00000513538 SPTBN2O15020 2390 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 WDR87Q6ZQQ6 2873 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 I3L4J1 428 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-212ENST00000513538 MED24O75448 989 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 POU2F2P09086 479 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 FGFR3P22607 806 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 KRT2P35908 639 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 TXKP42681 527 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 FOSBP53539 338 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 RAB33AQ14088 237 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 SLC5A9Q2M3M2 681 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 SLC44A4Q53GD3 710 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 GLRA4Q5JXX5 417 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 AXDND1Q5T1B0 1012 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-212ENST00000513538 LIN9Q5TKA1 542 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 ZC3H14Q6PJT7 736 aaKnown RBP10.66□□□□□ -0.7
TCOF1-212ENST00000513538 NECAB1Q8N987 351 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 PRIMPOLQ96LW4 560 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 KIFC3Q9BVG8 833 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 PLA2G2FQ9BZM2 168 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 LTB4R2Q9NPC1 389 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 PRMT7Q9NVM4 692 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-212ENST00000513538 SPATA6Q9NWH7 488 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-212ENST00000513538 MTRRQ9UBK8 725 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 TICRRQ7Z2Z1 1910 aa10.66□□□□□ -0.7
TCOF1-212ENST00000513538 PDCD11Q14690 1871 aaKnown RBP10.66□□□□□ -0.7
TCOF1-212ENST00000513538 F5P12259 2224 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 BTBD18B2RXH4 712 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 N4BP3O15049 544 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 NEMFO60524 1076 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 THP07101 528 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 XBP1P17861 261 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 TARSP26639 723 aaKnown RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 TKTP29401 623 aaKnown RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 OR1D2P34982 312 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 PRKCQQ04759 706 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 FZD5Q13467 585 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 PUM1Q14671 1186 aaKnown RBP eCLIP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 UBXN2BQ14CS0 331 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 RSPO4Q2I0M5 234 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 ZNF528Q3MIS6 628 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 PABPC1LQ4VXU2 614 aaKnown RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 MTSS1LQ765P7 747 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 CATSPER3Q86XQ3 398 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 NELL1Q92832 810 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 SHDQ96IW2 340 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 CCDC43Q96MW1 224 aaKnown RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 PPP1R10Q96QC0 940 aaKnown RBP10.65□□□□□ -0.7
TCOF1-212ENST00000513538 GOLGA2P5Q9HBQ8 144 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 POLD4Q9HCU8 107 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 GDAQ9Y2T3 454 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 CACNA1BQ00975 2339 aa10.65□□□□□ -0.7
TCOF1-212ENST00000513538 FRYLO94915 3013 aa10.65□□□□□ -0.71
TCOF1-212ENST00000513538 CITO14578 2027 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms