RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
PDPN-210ENST00000513143 ABHD14A-ACY1A0A1B0GW23 586 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.61□□□□□ -0.23
PDPN-210ENST00000513143 TTC26A0AVF1 554 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 RECQL4O94761 1208 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 IL18RAPO95256 599 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 EOMESO95936 686 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 ITGA4P13612 1032 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 ATF7P17544 494 aaPredicted RBP13.61□□□□□ -0.23
PDPN-210ENST00000513143 WNT7BP56706 349 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 CLDN10P78369 228 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 FPGSQ05932 587 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 PPP2R3AQ06190 1150 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 IKBKEQ14164 716 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 SURF1Q15526 300 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 MAN2A1Q16706 1144 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 ALKAL1Q6UXT8 129 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 USP37Q86T82 979 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 TUBGCP2Q9BSJ2 902 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 PDE11AQ9HCR9 933 aa13.61□□□□□ -0.23
PDPN-210ENST00000513143 ZMYND8Q9ULU4 1186 aaPredicted RBP13.61□□□□□ -0.23
PDPN-210ENST00000513143 EFCAB14O75071 495 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 SYN1P17600 705 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 AKAP5P24588 427 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
PDPN-210ENST00000513143 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
PDPN-210ENST00000513143 DLG4P78352 724 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 FANCCQ00597 558 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 XKR4Q5GH76 650 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 C1orf220Q5T0J3 134 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 SARM1Q6SZW1 724 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 C16orf59Q7L2K0 433 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 CD302Q8IX05 232 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 SLC35C1Q96A29 364 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 SNX27Q96L92 541 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 APOL6Q9BWW8 343 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 ASB7Q9H672 318 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 ELAC1Q9H777 363 aaKnown RBP13.6□□□□□ -0.23
PDPN-210ENST00000513143 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 TOPORSQ9NS56 1045 aaPredicted RBP13.6□□□□□ -0.23
PDPN-210ENST00000513143 TMEM161AQ9NX61 479 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 TAB2Q9NYJ8 693 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 PARP2Q9UGN5 583 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 GIT1Q9Y2X7 761 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDPN-210ENST00000513143 NR2E3Q9Y5X4 410 aa13.6□□□□□ -0.23
PDPN-210ENST00000513143 TDRD15B5MCY1 1934 aaKnown RBP13.59□□□□□ -0.23
PDPN-210ENST00000513143 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
PDPN-210ENST00000513143 MEIS3P2A8K0S8 358 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 LACTBL1A8MY62 500 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 BAIAP3O94812 1187 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 SERPINC1P01008 464 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 TPM2P07951 284 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 ACRP10323 421 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 ACTN1P12814 892 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
PDPN-210ENST00000513143 CLCN6P51797 869 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 KCNH2Q12809 1159 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 DCAF17Q5H9S7 520 aaPredicted RBP13.59□□□□□ -0.23
PDPN-210ENST00000513143 TCERG1LQ5VWI1 586 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 LPPQ93052 612 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 FNBP1Q96RU3 617 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 TSPAN18Q96SJ8 248 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
PDPN-210ENST00000513143 VPS16Q9H269 839 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 NDST4Q9H3R1 872 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
PDPN-210ENST00000513143 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 INPPL1O15357 1258 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 AP5Z1O43299 807 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 STX10O60499 249 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 FGBP02675 491 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
PDPN-210ENST00000513143 TRIM49P0CI25 452 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 TRIM49CP0CI26 452 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
PDPN-210ENST00000513143 KCNE1P15382 129 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 GTF2H1P32780 548 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 AP3M2P53677 418 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 EPHB4P54760 987 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 PPP3CAQ08209 521 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 FILIP1LQ4L180 1135 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDPN-210ENST00000513143 NT5DC4Q86YG4 428 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 WDR49Q8IV35 697 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 ZNF516Q92618 1163 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 NAP1L5Q96NT1 182 aaPredicted RBP13.58□□□□□ -0.24
PDPN-210ENST00000513143 CGRRF1Q99675 332 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 LBHD1Q9BQE6 289 aaPredicted RBP13.58□□□□□ -0.24
PDPN-210ENST00000513143 CXCL16Q9H2A7 254 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 RSAD1Q9HA92 442 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms