RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TNFSF13BQ9Y275 285 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 SSX2IPQ9Y2D8 614 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 ZDHHC9Q9Y397 364 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 HCN4Q9Y3Q4 1203 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 C5orf42Q9H799 3197 aa7.13□□□□□ -1.27
KDM3B-208ENST00000512928 MUC6Q6W4X9 2439 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 ZMYM2Q9UBW7 1377 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 TDRD15B5MCY1 1934 aaKnown RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 PI4K2BG5E9Z4 385 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 H0YCG3 227 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 PTGESO14684 152 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 HNRNPDLO14979 420 aaKnown RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 INPPL1O15357 1258 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 CLDN3O15551 220 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 SLC26A4O43511 780 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 KIF4AO95239 1232 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 BRD1O95696 1058 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 ADH1AP07327 375 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 CNPP09543 421 aaKnown RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 SPATA31D3P0C874 917 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 MCF2P10911 925 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 HOXB8P17481 243 aaPredicted RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 RPL17P18621 184 aaKnown RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 GRM5P41594 1212 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 STAT6P42226 847 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 NOLC1Q14978 699 aaKnown RBP eCLIP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 PTPAQ15257 358 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 USP41Q3LFD5 358 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 FAM171A1Q5VUB5 890 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 KANK3Q6NY19 840 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 SYCE2Q6PIF2 218 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 ELMSAN1Q6PJG2 1045 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 MPZL3Q6UWV2 235 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 TMC5Q6UXY8 1006 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 SPATA31D4Q6ZUB0 917 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 TAS1R3Q7RTX0 852 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 HAUS6Q7Z4H7 955 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 PALB2Q86YC2 1186 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 PDILTQ8N807 584 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 TMEM161BQ8NDZ6 487 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 LRRC15Q8TF66 581 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 SPIRE2Q8WWL2 714 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 RIN2Q8WYP3 895 aaPredicted RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 ZBTB45Q96K62 511 aaPredicted RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 FBXL18Q96ME1 805 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 RIPOR3Q96MK2 946 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 ACAP3Q96P50 834 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 KLHL5Q96PQ7 755 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 GPR62Q9BZJ7 368 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 GOLGA2P5Q9HBQ8 144 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 MAN1C1Q9NR34 630 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 BLOC1S4Q9NUP1 217 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 DZANK1Q9NVP4 752 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 MUTYHQ9UIF7 546 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
KDM3B-208ENST00000512928 KMT2EQ8IZD2 1858 aa7.12□□□□□ -1.27
KDM3B-208ENST00000512928 I3L4J1 428 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 TEX28O15482 410 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 DCXO43602 365 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 TRAK2O60296 914 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 GPR37L1O60883 481 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 TOM1L1O75674 476 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 B3GAT3O94766 335 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 GLUD1P00367 558 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 PRR29P0C7W0 189 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 ZSCAN22P10073 491 aaPredicted RBP7.11□□□□□ -1.27
KDM3B-208ENST00000512928 ALADP13716 330 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 IDEP14735 1019 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 NMT1P30419 496 aaKnown RBP7.11□□□□□ -1.27
KDM3B-208ENST00000512928 CLCN4P51793 760 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 CLCNKBP51801 687 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 NCKAP1LP55160 1127 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 DSG1Q02413 1049 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 ITIH3Q06033 890 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 SPAG1Q07617 926 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 KCNC3Q14003 757 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 SLC39A14Q15043 492 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 RTP2Q5QGT7 225 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 ATAT1Q5SQI0 421 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 PRSS55Q6UWB4 352 aaPredicted RBP7.11□□□□□ -1.27
KDM3B-208ENST00000512928 ZPBP2Q6X784 338 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 TMEM184AQ6ZMB5 413 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 CCDC73Q6ZRK6 1079 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 SV2BQ7L1I2 683 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 RNF135Q8IUD6 432 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 NOC3LQ8WTT2 800 aaKnown RBP7.11□□□□□ -1.27
KDM3B-208ENST00000512928 FAM212AQ96EL1 285 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 SNX27Q96L92 541 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 TTPALQ9BTX7 342 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 PHF7Q9BWX1 381 aaPredicted RBP7.11□□□□□ -1.27
KDM3B-208ENST00000512928 CCSER1Q9C0I3 900 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 S1PR5Q9H228 398 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 ADAM7Q9H2U9 754 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 SFXN1Q9H9B4 322 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 MRPL44Q9H9J2 332 aaKnown RBP7.11□□□□□ -1.27
KDM3B-208ENST00000512928 PIDD1Q9HB75 910 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 SLC38A7Q9NVC3 462 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 TBC1D7Q9P0N9 293 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms