RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 KCNH7Q9NS40 1196 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 EBF1Q9UH73 591 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 MAD2L2Q9UI95 211 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 CEP131Q9UPN4 1083 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 PCDHB2Q9Y5E7 798 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 ZMYM2Q9UBW7 1377 aa10.6□□□□□ -0.71
CLCN3-208ENST00000512813 THADAQ6YHU6 1953 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 PNMA6FA0A0J9YX94 578 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 MICAL2O94851 1124 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 RLBP1P12271 317 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 ATP4AP20648 1035 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 ITPKBP27987 946 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 CCR10P46092 362 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 HAND2P61296 217 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 MRPL10Q7Z7H8 261 aaKnown RBP10.59□□□□□ -0.71
CLCN3-208ENST00000512813 NLRP7Q8WX94 980 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 PIGKQ92643 395 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 HHIPQ96QV1 700 aa10.59□□□□□ -0.71
CLCN3-208ENST00000512813 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
CLCN3-208ENST00000512813 TNRC6BQ9UPQ9 1833 aaKnown RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 USP9YO00507 2555 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 PALM3A6NDB9 673 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 ERVH48-1M5A8F1 160 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 CHADO15335 359 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 NR1I2O75469 434 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 CCNE2O96020 404 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 VIPR2P41587 438 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 TSHZ3Q63HK5 1081 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 SLC23A3Q6PIS1 610 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 TMPRSS7Q7RTY8 843 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 GPR155Q7Z3F1 870 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 SIRT2Q8IXJ6 389 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 ZNF513Q8N8E2 541 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 ZSCAN10Q96SZ4 725 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 COLEC11Q9BWP8 271 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 GCOM2Q9BZD3 368 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 RNF41Q9H4P4 317 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 LY9Q9HBG7 655 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 POLMQ9NP87 494 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 MBD1Q9UIS9 605 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.72
CLCN3-208ENST00000512813 PI4KAP42356 2102 aa10.58□□□□□ -0.72
CLCN3-208ENST00000512813 TRABD2BA6NFA1 517 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
CLCN3-208ENST00000512813 CYTH3O43739 400 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 OPHN1O60890 802 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 APBB3O95704 486 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 CD59P13987 128 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 DHPSP49366 369 aaPredicted RBP10.57□□□□□ -0.72
CLCN3-208ENST00000512813 FCHO2Q0JRZ9 810 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 PSMD5Q16401 504 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 MAPK6Q16659 721 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 TOGARAM2Q6ZUX3 1019 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 TCEAL4Q96EI5 215 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 GPATCH3Q96I76 525 aa10.57□□□□□ -0.72
CLCN3-208ENST00000512813 SEPT9Q9UHD8 586 aaPredicted RBP10.57□□□□□ -0.72
CLCN3-208ENST00000512813 SF3B1O75533 1304 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLCN3-208ENST00000512813 TDRD15B5MCY1 1934 aaKnown RBP10.56□□□□□ -0.72
CLCN3-208ENST00000512813 PCDH15Q96QU1 1955 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 HEPACAM2A8MVW5 462 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 ZNF197O14709 1029 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 ADAM12O43184 909 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 SLC28A2O43868 658 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 GP1BBP13224 206 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 PTPN2P17706 415 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 ZNF76P36508 570 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 ATXN3P54252 364 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-208ENST00000512813 RIPPLY3P57055 190 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 RAB33AQ14088 237 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 SYT12Q8IV01 421 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 YAF2Q8IY57 180 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 CKAP2LQ8IYA6 745 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 LNX1Q8TBB1 728 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-208ENST00000512813 WBP1Q96G27 269 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 ZSWIM3Q96MP5 696 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 MXRA8Q9BRK3 442 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 AGPAT5Q9NUQ2 364 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 KIAA1522Q9P206 1035 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-208ENST00000512813 DNMT3LQ9UJW3 386 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 SRPK3Q9UPE1 567 aa10.56□□□□□ -0.72
CLCN3-208ENST00000512813 MAFBQ9Y5Q3 323 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-208ENST00000512813 MYH9P35579 1960 aaKnown RBP10.56□□□□□ -0.72
CLCN3-208ENST00000512813 BCKDHBP21953 392 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 KIF5BP33176 963 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 EIF2S3P41091 472 aaKnown RBP10.55□□□□□ -0.72
CLCN3-208ENST00000512813 CCR2P41597 374 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 DPP6P42658 865 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 CDC42EP1Q00587 391 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 USP39Q53GS9 565 aaKnown RBP10.55□□□□□ -0.72
CLCN3-208ENST00000512813 SWSAP1Q6NVH7 229 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 MIS18BP1Q6P0N0 1132 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 LRRC69Q6ZNQ3 347 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 GLRX5Q86SX6 157 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 PLEKHM2Q8IWE5 1019 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 ZSCAN18Q8TBC5 510 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms