RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 TNFSF13BQ9Y275 285 aa13.22□□□□□ -0.29
CDK7-208ENST00000512687 C2CD4DB7Z1M9 353 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.29
CDK7-208ENST00000512687 THP07101 528 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 MYBP10242 640 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 PROZP22891 400 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 RESTQ13127 1097 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 RTP2Q5QGT7 225 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 CES5AQ6NT32 575 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
CDK7-208ENST00000512687 PPP1R10Q96QC0 940 aaKnown RBP13.21□□□□□ -0.29
CDK7-208ENST00000512687 TARS2Q9BW92 718 aaKnown RBP13.21□□□□□ -0.29
CDK7-208ENST00000512687 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 SFXN1Q9H9B4 322 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 CLIC4Q9Y696 253 aa13.21□□□□□ -0.29
CDK7-208ENST00000512687 WDFY4Q6ZS81 3184 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 NR1I2O75469 434 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 PLS3P13797 630 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
CDK7-208ENST00000512687 PLCG1P19174 1290 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 GRM5P41594 1212 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 MTHFRP42898 656 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 ZXDAP98168 799 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
CDK7-208ENST00000512687 KARSQ15046 597 aaKnown RBP13.2□□□□□ -0.3
CDK7-208ENST00000512687 PTPAQ15257 358 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
CDK7-208ENST00000512687 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 HFE2Q6ZVN8 426 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 TMEM161BQ8NDZ6 487 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 RIN2Q8WYP3 895 aaPredicted RBP13.2□□□□□ -0.3
CDK7-208ENST00000512687 EDAQ92838 391 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 AK8Q96MA6 479 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 RIPOR3Q96MK2 946 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 TIPINQ9BVW5 301 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 MRPL4Q9BYD3 311 aaKnown RBP13.2□□□□□ -0.3
CDK7-208ENST00000512687 C17orf75Q9HAS0 396 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
CDK7-208ENST00000512687 SF3B1O75533 1304 aaKnown RBP eCLIP13.19□□□□□ -0.36e-6■■■■■ 85.1
CDK7-208ENST00000512687 SCN1AP35498 2009 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 TADA2AO75478 443 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 ADH1AP07327 375 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
CDK7-208ENST00000512687 SYT1P21579 422 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 OSTNP61366 133 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 MCM6Q14566 821 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 ALKAL1Q6UXT8 129 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 USP49Q70CQ1 688 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 GPR149Q86SP6 731 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 TMEM130Q8N3G9 435 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 SPIRE2Q8WWL2 714 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 SNX27Q96L92 541 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
CDK7-208ENST00000512687 NECTIN4Q96NY8 510 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
CDK7-208ENST00000512687 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 SSX2IPQ9Y2D8 614 aa13.19□□□□□ -0.3
CDK7-208ENST00000512687 MUC6Q6W4X9 2439 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 SLC26A4O43511 780 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 RFPL2O75678 378 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 BRD1O95696 1058 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 BMP15O95972 392 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 GLUD1P00367 558 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 HARSP12081 509 aaKnown RBP13.18□□□□□ -0.3
CDK7-208ENST00000512687 LONP1P36776 959 aaKnown RBP13.18□□□□□ -0.3
CDK7-208ENST00000512687 CLCNKBP51801 687 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 DHX8Q14562 1220 aaKnown RBP13.18□□□□□ -0.3
CDK7-208ENST00000512687 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 FAM171A1Q5VUB5 890 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 RAD54LQ92698 747 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 KCND2Q9NZV8 630 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 FNIP2Q9P278 1114 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 MTMR6Q9Y217 621 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 HCN4Q9Y3Q4 1203 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 NR2E1Q9Y466 385 aa13.18□□□□□ -0.3
CDK7-208ENST00000512687 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
CDK7-208ENST00000512687 SMIM28A0A1B0GU29 152 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 TMEM221A6NGB7 291 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms