RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-238ENST00000512620 PPP1R14CQ8TAE6 165 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 SNX33Q8WV41 574 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 CLPTM1LQ96KA5 538 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 RPL10LQ96L21 214 aaKnown RBP4.29□□□□□ -1.72
CAST-238ENST00000512620 VRK1Q99986 396 aaPredicted RBP4.29□□□□□ -1.72
CAST-238ENST00000512620 PDCD2LQ9BRP1 358 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 TMEM168Q9H0V1 697 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 TMEM60Q9H2L4 133 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 PLCB1Q9NQ66 1216 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 NTMQ9P121 344 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 FBXO10Q9UK96 956 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 EHBP1L1Q8N3D4 1523 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 TCOF1Q13428 1488 aaKnown RBP4.29□□□□□ -1.72
CAST-238ENST00000512620 SNAPC4Q5SXM2 1469 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 SPATA31E1Q6ZUB1 1445 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 E9PCH4 1651 aa4.29□□□□□ -1.72
CAST-238ENST00000512620 DHX29Q7Z478 1369 aaKnown RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 SAMD9Q5K651 1589 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 KIF7Q2M1P5 1343 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 RPTORQ8N122 1335 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 ARHGEF11O15085 1522 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 UGGT2Q9NYU1 1516 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 CCDC189A1A4V9 331 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 NPHP1O15259 732 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 SH3BP5O60239 455 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 MAFO75444 373 aaPredicted RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 TCEA3O75764 348 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 TUSC2O75896 110 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 TOX4O94842 621 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 GLDCP23378 1020 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 ECHS1P30084 290 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 CSF2RBP32927 897 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 SARSP49591 514 aaKnown RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 TARDBPQ13148 414 aaKnown RBP eCLIP4.28□□□□□ -1.72
CAST-238ENST00000512620 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 RALBP1Q15311 655 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 LONRF1Q17RB8 773 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 KIAA0753Q2KHM9 967 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 TRIM68Q6AZZ1 485 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 SWSAP1Q6NVH7 229 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 DARS2Q6PI48 645 aaKnown RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 C1orf228Q6PIY5 440 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 NPNTQ6UXI9 565 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 CLEC14AQ86T13 490 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 SRLQ86TD4 932 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 SKAP1Q86WV1 359 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 DRC7Q8IY82 874 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 UNC5BQ8IZJ1 945 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 PQLC1Q8N2U9 271 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 ZGPATQ8N5A5 531 aaKnown RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 PLA2G15Q8NCC3 412 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 PLBD2Q8NHP8 589 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 MDM1Q8TC05 714 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 HOXB13Q92826 284 aaPredicted RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 GCDHQ92947 438 aaPredicted RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 RGMAQ96B86 450 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 PAWRQ96IZ0 340 aaKnown RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 TMX3Q96JJ7 454 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 SELENOOQ9BVL4 669 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 PPCSQ9HAB8 311 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 TDP1Q9NUW8 608 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 DMTF1Q9Y222 760 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 RUVBL1Q9Y265 456 aaKnown RBP4.28□□□□□ -1.72
CAST-238ENST00000512620 PCDHA3Q9Y5H8 950 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 TEX14Q8IWB6 1497 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 FHOD3Q2V2M9 1422 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 KIF14Q15058 1648 aa4.28□□□□□ -1.72
CAST-238ENST00000512620 GRIN2BQ13224 1484 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 RPRD2Q5VT52 1461 aaKnown RBP4.27□□□□□ -1.73
CAST-238ENST00000512620 NPIPB6E9PJ23 425 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 GOLIM4O00461 696 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 MGEA5O60502 916 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 PQBP1O60828 265 aaKnown RBP4.27□□□□□ -1.73
CAST-238ENST00000512620 ITGA10O75578 1167 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 CHGBP05060 677 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 RPLP2P05387 115 aaKnown RBP4.27□□□□□ -1.73
CAST-238ENST00000512620 SETSIPP0DME0 302 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 FPR1P21462 350 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 PAX3P23760 479 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 PTPN7P35236 360 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 CASRP41180 1078 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 AFF3P51826 1226 aaKnown RBP4.27□□□□□ -1.73
CAST-238ENST00000512620 RRP1P56182 461 aaKnown RBP4.27□□□□□ -1.73
CAST-238ENST00000512620 BPIFB4P59827 614 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 BTKQ06187 659 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 STK3Q13188 491 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 KRT72Q14CN4 511 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 MAN2A1Q16706 1144 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 MST1LQ2TV78 715 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 KHDC1Q4VXA5 237 aaKnown RBP4.27□□□□□ -1.73
CAST-238ENST00000512620 INO80DQ53TQ3 878 aaPredicted RBP4.27□□□□□ -1.73
CAST-238ENST00000512620 FAM83BQ5T0W9 1011 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 AGBL4Q5VU57 503 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 ANO1Q5XXA6 986 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 KRT40Q6A162 431 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 PPP4R3AQ6IN85 833 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 TAS1R1Q7RTX1 841 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 RSPH3Q86UC2 560 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 CARFQ8N187 725 aa4.27□□□□□ -1.73
CAST-238ENST00000512620 LILRA3Q8N6C8 439 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms