RNA–Protein interactions for RNA: ENST00000511268.6

CLPTM1L-211, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-211ENST00000511268 TCHPQ9BT92 498 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 HERC2P3Q9BVR0 1158 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 PTPRHQ9HD43 1115 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 ADAM28Q9UKQ2 775 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
CLPTM1L-211ENST00000511268 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 TEX28O15482 410 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 SLC26A4O43511 780 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 PLCG1P19174 1290 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 GLUD2P49448 558 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 DSG1Q02413 1049 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 ITIH3Q06033 890 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 MCM6Q14566 821 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 HSP90AA2PQ14568 343 aaPredicted RBP13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 SLC39A14Q15043 492 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 PTPAQ15257 358 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 NAB2Q15742 525 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 APBB1IPQ7Z5R6 666 aaPredicted RBP13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 GPBP1Q86WP2 473 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 RNF168Q8IYW5 571 aaPredicted RBP13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 CEP120Q8N960 986 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 FEZF2Q8TBJ5 459 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 SPIRE2Q8WWL2 714 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 CLIC6Q96NY7 704 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 CDT1Q9H211 546 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 BLOC1S4Q9NUP1 217 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 KCND2Q9NZV8 630 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 ZMYM2Q9UBW7 1377 aa13.14□□□□□ -0.31
CLPTM1L-211ENST00000511268 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 SPTLC2O15270 562 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 SPATA31D3P0C874 917 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 STRN3Q13033 797 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 ZNF568Q3ZCX4 644 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 GLRA4Q5JXX5 417 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 ATAT1Q5SQI0 421 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 MPZL3Q6UWV2 235 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 ALKAL1Q6UXT8 129 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 SPATA31D4Q6ZUB0 917 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 CEP57Q86XR8 500 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 PALB2Q86YC2 1186 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 MYCT1Q8N699 235 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 RAD54LQ92698 747 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 ACAP3Q96P50 834 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 CCDC94Q9BW85 323 aaPredicted RBP13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 RXFP1Q9HBX9 757 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 DZANK1Q9NVP4 752 aa13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
CLPTM1L-211ENST00000511268 SMIM28A0A1B0GU29 152 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 PPP6R2O75170 966 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 KIF4AO95239 1232 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 ADH1AP07327 375 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 MAPTP10636 758 aaKnown RBP13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 HARSP12081 509 aaKnown RBP13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 RPL17P18621 184 aaKnown RBP13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 PROZP22891 400 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 GRM5P41594 1212 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 MTHFRP42898 656 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 YARSP54577 528 aaKnown RBP13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 HERC4Q5GLZ8 1057 aaPredicted RBP13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 FAM171A1Q5VUB5 890 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 KCNG4Q8TDN1 519 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 NECTIN4Q96NY8 510 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 PPP1R10Q96QC0 940 aaKnown RBP13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 REEP2Q9BRK0 252 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
CLPTM1L-211ENST00000511268 ABLIM1O14639 778 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 TOM1L1O75674 476 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 B3GAT3O94766 335 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 FAM13AO94988 1023 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 KRT18P05783 430 aaKnown RBP13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 MCF2P10911 925 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 PTMSP20962 102 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 ME1P48163 572 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 CLCNKBP51801 687 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
CLPTM1L-211ENST00000511268 DCLRE1AQ6PJP8 1040 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms