RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	ZPBP2	Q6X784	338 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	GPR149	Q86SP6	731 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	C12orf76	Q8N812	135 aa	Predicted RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	CEP120	Q8N960	986 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	TMEM87A	Q8NBN3	555 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	CMAS	Q8NFW8	434 aa	Predicted RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	EDA	Q92838	391 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	RIPOR3	Q96MK2	946 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	METRN	Q9UJH8	293 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	GDA	Q9Y2T3	454 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	TECTA	O75443	2155 aa		13.32	□□□□□ -0.28
CLDND1-223	ENST00000511081	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	SMIM28	A0A1B0GU29	152 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	TADA2A	O75478	443 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	TOM1L1	O75674	476 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	SSB	P05455	408 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	ADH1A	P07327	375 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	KCNE1	P15382	129 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	CA8	P35219	290 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	ATAT1	Q5SQI0	421 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	FAM173B	Q6P4H8	233 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	DCLRE1A	Q6PJP8	1040 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	MPZL3	Q6UWV2	235 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	CYP26C1	Q6V0L0	522 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	C15orf39	Q6ZRI6	1047 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	USP49	Q70CQ1	688 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	RABGGTA	Q92696	567 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	RAD54L	Q92698	747 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZBTB45	Q96K62	511 aa	Predicted RBP	13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	RPGRIP1	Q96KN7	1286 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	APOL5	Q9BWW9	433 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	POMK	Q9H5K3	350 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	LARS	Q9P2J5	1176 aa	Known RBP	13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	CACNG4	Q9UBN1	327 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	MUTYH	Q9UIF7	546 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	CDH22	Q9UJ99	828 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	FBXO2	Q9UK22	296 aa	Predicted RBP	13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	UST	Q9Y2C2	406 aa		13.31	□□□□□ -0.28
CLDND1-223	ENST00000511081	CASTOR2	A6NHX0	329 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081		H0YCG3	227 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	C2CD2L	O14523	706 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	MEFV	O15553	781 aa	Predicted RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	PLCG1	P19174	1290 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	IGFBP6	P24592	240 aa	Predicted RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	MCL1	Q07820	350 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	RAD51AP2	Q09MP3	1159 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	ELAVL2	Q12926	359 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	MCM6	Q14566	821 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	SLC39A14	Q15043	492 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	KARS	Q15046	597 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	UPP1	Q16831	310 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	RARS2	Q5T160	578 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	HAUS6	Q7Z4H7	955 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	BMP8A	Q7Z5Y6	402 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	LNX1	Q8TBB1	728 aa	Predicted RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	FEZF2	Q8TBJ5	459 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	PIK3R5	Q8WYR1	880 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	EPSTI1	Q96J88	318 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	UROC1	Q96N76	676 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZMAT2	Q96NC0	199 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	FIZ1	Q96SL8	496 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	REEP2	Q9BRK0	252 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	CCDC94	Q9BW85	323 aa	Predicted RBP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	PLEKHA4	Q9H4M7	779 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	SFXN1	Q9H9B4	322 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	DPP7	Q9UHL4	492 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	NR2E1	Q9Y466	385 aa		13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CLDND1-223	ENST00000511081	CIT	O14578	2027 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	FAM86C2P	A6NEL3	165 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	STX6	O43752	255 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	KIF4A	O95239	1232 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	PIGR	P01833	764 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	FGFR3	P22607	806 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZXDA	P98168	799 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	CREM	Q03060	361 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	STRN3	Q13033	797 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	SLC10A6	Q3KNW5	377 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZNF568	Q3ZCX4	644 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	RTP2	Q5QGT7	225 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	TMC5	Q6UXY8	1006 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	GPBP1	Q86WP2	473 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	ZDHHC14	Q8IZN3	488 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	RIN2	Q8WYP3	895 aa	Predicted RBP	13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	B3GALT6	Q96L58	329 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	ACAP3	Q96P50	834 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	CLSTN3	Q9BQT9	956 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	TCHP	Q9BT92	498 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	TTPAL	Q9BTX7	342 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	HAPLN2	Q9GZV7	340 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	ST6GALNAC4	Q9H4F1	302 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	CNTN3	Q9P232	1028 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	PLXNA3	P51805	1871 aa		13.29	□□□□□ -0.28
CLDND1-223	ENST00000511081	CLDN3	O15551	220 aa		13.28	□□□□□ -0.28
CLDND1-223	ENST00000511081	TGM5	O43548	720 aa		13.28	□□□□□ -0.28

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