RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 SERINC5Q86VE9 423 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 MYRIPQ8NFW9 859 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 UCMAQ8WVF2 138 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 CLIC4Q9Y696 253 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 ACKR2O00590 384 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 OGTO15294 1046 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 BMPR1AP36894 532 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 ST8SIA6P61647 398 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 CCDC157Q569K6 752 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 HSP90AA4PQ58FG1 418 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 C9orf50Q5SZB4 431 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 LHX8Q68G74 356 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 HAUS2Q9NVX0 235 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 TRPM5Q9NZQ8 1165 aa13.41□□□□□ -0.26
LIN54-210ENST00000510877 TMEM150BA6NC51 233 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 MAFO75444 373 aaPredicted RBP13.4□□□□□ -0.26
LIN54-210ENST00000510877 RECQL4O94761 1208 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 GJB5O95377 273 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 PDE12Q6L8Q7 609 aaKnown RBP13.4□□□□□ -0.26
LIN54-210ENST00000510877 ABHD15Q6UXT9 468 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 GBP6Q6ZN66 633 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 CPSF3Q9UKF6 684 aaKnown RBP13.4□□□□□ -0.26
LIN54-210ENST00000510877 FGF18O76093 207 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 LARGE1O95461 756 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 SPATA31D3P0C874 917 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 MXI1P50539 228 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 GRIK3Q13003 919 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 ARHGAP44Q17R89 818 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 PUS10Q3MIT2 529 aaKnown RBP13.4□□□□□ -0.26
LIN54-210ENST00000510877 PTCRAQ6ISU1 281 aaPredicted RBP13.4□□□□□ -0.26
LIN54-210ENST00000510877 SPATA31D4Q6ZUB0 917 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 C10orf67Q8IYJ2 551 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 PCDHB4Q9Y5E5 795 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 MUTP22033 750 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 NEK11Q8NG66 645 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 SRRTQ9BXP5 876 aaKnown RBP13.4□□□□□ -0.26
LIN54-210ENST00000510877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.4□□□□□ -0.26
LIN54-210ENST00000510877 HES2Q9Y543 173 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
LIN54-210ENST00000510877 GOLGA6L9A6NEM1 432 aa13.4□□□□□ -0.27
LIN54-210ENST00000510877 ADCY5O95622 1261 aa13.4□□□□□ -0.27
LIN54-210ENST00000510877 RARRES1P49788 294 aa13.4□□□□□ -0.27
LIN54-210ENST00000510877 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.27
LIN54-210ENST00000510877 TMEM240Q5SV17 173 aa13.4□□□□□ -0.27
LIN54-210ENST00000510877 CD207Q9UJ71 328 aa13.4□□□□□ -0.27
LIN54-210ENST00000510877 GNEQ9Y223 722 aaKnown RBP13.4□□□□□ -0.27
LIN54-210ENST00000510877 GNA14O95837 355 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 TTC39CQ8N584 583 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
LIN54-210ENST00000510877 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 OR1D2P34982 312 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 WDR5P61964 334 aaKnown RBP13.39□□□□□ -0.27
LIN54-210ENST00000510877 UBE2HP62256 183 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 E2F5Q15329 346 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 TDRD10Q5VZ19 366 aaKnown RBP13.39□□□□□ -0.27
LIN54-210ENST00000510877 SNX21Q969T3 373 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 EPSTI1Q96J88 318 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 NECTIN4Q96NY8 510 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
LIN54-210ENST00000510877 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 URI1O94763 535 aaPredicted RBP13.39□□□□□ -0.27
LIN54-210ENST00000510877 ZNF202O95125 648 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 ZNF18P17022 549 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 ITGB3BPQ13352 177 aaPredicted RBP13.39□□□□□ -0.27
LIN54-210ENST00000510877 MAP3K21Q5TCX8 1036 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 KLHL23Q8NBE8 558 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 PGLYRP2Q96PD5 576 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 ARFGAP3Q9NP61 516 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
LIN54-210ENST00000510877 CYB561D2O14569 222 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 NMT1P30419 496 aaKnown RBP13.38□□□□□ -0.27
LIN54-210ENST00000510877 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
LIN54-210ENST00000510877 TUSC3Q13454 348 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 UROC1Q96N76 676 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 UHRF1Q96T88 793 aaPredicted RBP13.38□□□□□ -0.27
LIN54-210ENST00000510877 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 ENPP3O14638 875 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 AP3M2P53677 418 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 MOCS3O95396 460 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 MCF2P10911 925 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 TUBB4BP68371 445 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 DZANK1Q9NVP4 752 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
LIN54-210ENST00000510877 NPTX2P47972 431 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 PPP2R5CQ13362 524 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 ZNF394Q53GI3 561 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms