RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 KIF15Q9NS87 1388 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 LMTK2Q8IWU2 1503 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 SEC24DO94855 1032 aaPredicted RBP9.27□□□□□ -0.93
USP53-206ENST00000510737 ITGB1P05556 798 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 EZH2Q15910 746 aaKnown RBP9.27□□□□□ -0.93
USP53-206ENST00000510737 LRRC55Q6ZSA7 311 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 EFHBQ8N7U6 833 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 OR52N2Q8NGI0 321 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 MRFAP1L1Q96HT8 127 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 CPPED1Q9BRF8 314 aaPredicted RBP9.27□□□□□ -0.93
USP53-206ENST00000510737 INTS7Q9NVH2 962 aaKnown RBP9.27□□□□□ -0.93
USP53-206ENST00000510737 ZKSCAN5Q9Y2L8 839 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 PCDHB6Q9Y5E3 794 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 CD2APQ9Y5K6 639 aa9.27□□□□□ -0.93
USP53-206ENST00000510737 XRN1Q8IZH2 1706 aaKnown RBP9.27□□□□□ -0.93
USP53-206ENST00000510737 COL4A3Q01955 1670 aa9.26□□□□□ -0.93
USP53-206ENST00000510737 ADGRL3Q9HAR2 1447 aa9.26□□□□□ -0.93
USP53-206ENST00000510737 PFKMP08237 780 aa9.26□□□□□ -0.93
USP53-206ENST00000510737 CD40P25942 277 aa9.26□□□□□ -0.93
USP53-206ENST00000510737 ZSWIM4Q9H7M6 989 aa9.26□□□□□ -0.93
USP53-206ENST00000510737 MSRAQ9UJ68 235 aa9.26□□□□□ -0.93
USP53-206ENST00000510737 ERBINQ96RT1 1412 aa9.25□□□□□ -0.93
USP53-206ENST00000510737 SCAF4O95104 1147 aaKnown RBP9.25□□□□□ -0.93
USP53-206ENST00000510737 ABHD16AO95870 558 aa9.25□□□□□ -0.93
USP53-206ENST00000510737 POU3F2P20265 443 aaPredicted RBP9.25□□□□□ -0.93
USP53-206ENST00000510737 CSRP2Q16527 193 aa9.25□□□□□ -0.93
USP53-206ENST00000510737 KIF18BQ86Y91 864 aa9.25□□□□□ -0.93
USP53-206ENST00000510737 IFT57Q9NWB7 429 aa9.25□□□□□ -0.93
USP53-206ENST00000510737 USP18Q9UMW8 372 aa9.25□□□□□ -0.93
USP53-206ENST00000510737 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP53-206ENST00000510737 SLIT2O94813 1529 aa9.25□□□□□ -0.93
USP53-206ENST00000510737 METP08581 1390 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 MRPL49Q13405 166 aaKnown RBP9.24□□□□□ -0.93
USP53-206ENST00000510737 PCBP1Q15365 356 aaKnown RBP eCLIP9.24□□□□□ -0.93
USP53-206ENST00000510737 VPS72Q15906 364 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 TKFCQ3LXA3 575 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 SYNE4Q8N205 404 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 CDYL2Q8N8U2 506 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 OR5M3Q8NGP4 307 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 SREK1Q8WXA9 508 aaKnown RBP9.24□□□□□ -0.93
USP53-206ENST00000510737 CAMKK2Q96RR4 588 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 KCNH6Q9H252 994 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 NALCNQ8IZF0 1738 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 TNS1Q9HBL0 1735 aaKnown RBP9.24□□□□□ -0.93
USP53-206ENST00000510737 MYO5BQ9ULV0 1848 aa9.24□□□□□ -0.93
USP53-206ENST00000510737 TMEM131LA2VDJ0 1609 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 GCC2Q8IWJ2 1684 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 TRIM24O15164 1050 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 MAFGO15525 162 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 LPXNO60711 386 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 GAS7O60861 476 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 DNAJC6O75061 913 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 LY6G5CQ5SRR4 150 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 XYLT1Q86Y38 959 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 LYSMD2Q8IV50 215 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 RNPC3Q96LT9 517 aaKnown RBP9.23□□□□□ -0.93
USP53-206ENST00000510737 PDCD2LQ9BRP1 358 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 PIF1Q9H611 641 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 TMPRSS11EQ9UL52 423 aa9.23□□□□□ -0.93
USP53-206ENST00000510737 DISP2A7MBM2 1401 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 CENPVL1A0A0U1RR11 272 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 PRSS38A1L453 326 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 NRP1O14786 923 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 PPFIA2O75334 1257 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 LMNAP02545 664 aaKnown RBP9.22□□□□□ -0.93
USP53-206ENST00000510737 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
USP53-206ENST00000510737 NEK4P51957 841 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 CCDC144BQ3MJ40 725 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 PLEKHG4Q58EX7 1191 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 DPY19L2P1Q6NXN4 242 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 KCNV1Q6PIU1 500 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 ESPNLQ6ZVH7 1005 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 TAS1R1Q7RTX1 841 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 LRRTM3Q86VH5 581 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 LILRA3Q8N6C8 439 aaPredicted RBP9.22□□□□□ -0.93
USP53-206ENST00000510737 PRDM12Q9H4Q4 367 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 NINLQ9Y2I6 1382 aa9.22□□□□□ -0.93
USP53-206ENST00000510737 A0A1W2PR48 441 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 LEFTY2O00292 366 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 PTPAQ15257 358 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 SEPT7Q16181 437 aaKnown RBP9.21□□□□□ -0.94
USP53-206ENST00000510737 METTL24Q5JXM2 366 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 SMC1BQ8NDV3 1235 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 BEND2Q8NDZ0 799 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 GAB3Q8WWW8 586 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 IL17RAQ96F46 866 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 NDC1Q9BTX1 674 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 PACSIN3Q9UKS6 424 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 ABCC5O15440 1437 aa9.21□□□□□ -0.94
USP53-206ENST00000510737 GPRIN1Q7Z2K8 1008 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 FAM83AQ86UY5 434 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 SYT12Q8IV01 421 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 EPC1Q9H2F5 836 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 SPON1Q9HCB6 807 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 SPTLC3Q9NUV7 552 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 USP36Q9P275 1121 aaKnown RBP9.2□□□□□ -0.94
USP53-206ENST00000510737 EIF2B4Q9UI10 523 aaKnown RBP9.2□□□□□ -0.94
USP53-206ENST00000510737 MYOM3Q5VTT5 1437 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms