RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 HFE2Q6ZVN8 426 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 ZBTB33Q86T24 672 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 PALB2Q86YC2 1186 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 CMASQ8NFW8 434 aaPredicted RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 LNX1Q8TBB1 728 aaPredicted RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 HASPINQ8TF76 798 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 INTS4Q96HW7 963 aaKnown RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 MAN1C1Q9NR34 630 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.68■□□□□ 0.74
TPM3-220ENST00000509601 ARIH1Q9Y4X5 557 aaPredicted RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 TGM5O43548 720 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 PAPLNO95428 1278 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 GLUD1P00367 558 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 MCF2P10911 925 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 SMTNP53814 917 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 OSTNP61366 133 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 RESTQ13127 1097 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 KARSQ15046 597 aaKnown RBP19.67■□□□□ 0.74
TPM3-220ENST00000509601 ZNF568Q3ZCX4 644 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 FAM171A1Q5VUB5 890 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 DCLRE1AQ6PJP8 1040 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 PRSS55Q6UWB4 352 aaPredicted RBP19.67■□□□□ 0.74
TPM3-220ENST00000509601 USP49Q70CQ1 688 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 APBB1IPQ7Z5R6 666 aaPredicted RBP19.67■□□□□ 0.74
TPM3-220ENST00000509601 BMP8AQ7Z5Y6 402 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 KCNN1Q92952 543 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 CALML4Q96GE6 196 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 ZMAT2Q96NC0 199 aaKnown RBP19.67■□□□□ 0.74
TPM3-220ENST00000509601 CLSTN3Q9BQT9 956 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 TTPALQ9BTX7 342 aa19.67■□□□□ 0.74
TPM3-220ENST00000509601 SF3B1O75533 1304 aaKnown RBP eCLIP19.67■□□□□ 0.747e-7■■■■■ 108.6
TPM3-220ENST00000509601 CCDC195A0A1B0GUA6 201 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 RFPL2O75678 378 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 CLCNKBP51801 687 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 NCKAP1LP55160 1127 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 SOX4Q06945 474 aaPredicted RBP19.66■□□□□ 0.74
TPM3-220ENST00000509601 MCM6Q14566 821 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 PTPN21Q16825 1174 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 MPZL3Q6UWV2 235 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 C15orf39Q6ZRI6 1047 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 ZDHHC14Q8IZN3 488 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 HDAC7Q8WUI4 952 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 RAD54LQ92698 747 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 EPSTI1Q96J88 318 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 ACAP3Q96P50 834 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 TCHPQ9BT92 498 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 CCDC94Q9BW85 323 aaPredicted RBP19.66■□□□□ 0.74
TPM3-220ENST00000509601 CCSER1Q9C0I3 900 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 HAPLN2Q9GZV7 340 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 USTQ9Y2C2 406 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 PLXNA3P51805 1871 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 MYH11P35749 1972 aa19.66■□□□□ 0.74
TPM3-220ENST00000509601 MTCL1Q9Y4B5 1905 aaKnown RBP19.65■□□□□ 0.74
TPM3-220ENST00000509601 TMEM221A6NGB7 291 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 TMEM189-UBE2V1I3L0A0 370 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 M0R296 226 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 PLCG1P19174 1290 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 DDIT3P35638 169 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 DHX8Q14562 1220 aaKnown RBP19.65■□□□□ 0.74
TPM3-220ENST00000509601 UPP1Q16831 310 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 ZPBP2Q6X784 338 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 GPBP1Q86WP2 473 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 GLYCTKQ8IVS8 523 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 PIK3R5Q8WYR1 880 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 ZNF707Q96C28 371 aaPredicted RBP19.65■□□□□ 0.74
TPM3-220ENST00000509601 REEP2Q9BRK0 252 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 RHOBTB2Q9BYZ6 727 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 PLEKHA4Q9H4M7 779 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 GOLGA2P5Q9HBQ8 144 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 LIMD1Q9UGP4 676 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 ODF2LQ9ULJ1 636 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 MTMR6Q9Y217 621 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 HCN4Q9Y3Q4 1203 aa19.65■□□□□ 0.74
TPM3-220ENST00000509601 TOM1L1O75674 476 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 KCNE1P15382 129 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 FGFR3P22607 806 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 MARCKSP29966 332 aaPredicted RBP19.64■□□□□ 0.73
TPM3-220ENST00000509601 ZNF131P52739 623 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 YARSP54577 528 aaKnown RBP19.64■□□□□ 0.73
TPM3-220ENST00000509601 SIGLEC14Q08ET2 396 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 STRN3Q13033 797 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 SEZ6Q53EL9 994 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 SPECC1Q5M775 1068 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 HAUS6Q7Z4H7 955 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 CEP57Q86XR8 500 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 KREMEN2Q8NCW0 462 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 C3orf58Q8NDZ4 430 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 ASIC4Q96FT7 647 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 SNX27Q96L92 541 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 FOXD4L1Q9NU39 408 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 LARSQ9P2J5 1176 aaKnown RBP19.64■□□□□ 0.73
TPM3-220ENST00000509601 DPP7Q9UHL4 492 aa19.64■□□□□ 0.73
TPM3-220ENST00000509601 FBXO2Q9UK22 296 aaPredicted RBP19.64■□□□□ 0.73
TPM3-220ENST00000509601 SRPRBQ9Y5M8 271 aaKnown RBP19.64■□□□□ 0.73
TPM3-220ENST00000509601 C2orf16Q68DN1 1984 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 SPDYE4A6NLX3 237 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 K7ELQ4 463 aaPredicted RBP19.63■□□□□ 0.73
TPM3-220ENST00000509601 ADAM12O43184 909 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 B3GAT3O94766 335 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms