RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 LINC00301Q8NCQ3 95 aa17.21■□□□□ 0.35
COMMD8-202ENST00000509220 ACAP3Q96P50 834 aa17.21■□□□□ 0.35
COMMD8-202ENST00000509220 PPP1R10Q96QC0 940 aaKnown RBP17.21■□□□□ 0.35
COMMD8-202ENST00000509220 PHF7Q9BWX1 381 aaPredicted RBP17.21■□□□□ 0.35
COMMD8-202ENST00000509220 GPR62Q9BZJ7 368 aa17.21■□□□□ 0.35
COMMD8-202ENST00000509220 CXCL16Q9H2A7 254 aa17.21■□□□□ 0.35
COMMD8-202ENST00000509220 ADAM7Q9H2U9 754 aa17.21■□□□□ 0.35
COMMD8-202ENST00000509220 RXFP1Q9HBX9 757 aa17.21■□□□□ 0.35
COMMD8-202ENST00000509220 SF3B1O75533 1304 aaKnown RBP eCLIP17.21■□□□□ 0.34
COMMD8-202ENST00000509220 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 CLDN3O15551 220 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 TRAK2O60296 914 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 PPP6R2O75170 966 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 TBCAO75347 108 aaKnown RBP17.2■□□□□ 0.34
COMMD8-202ENST00000509220 C1RP00736 705 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 ADH1AP07327 375 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 ZSCAN22P10073 491 aaPredicted RBP17.2■□□□□ 0.34
COMMD8-202ENST00000509220 EPCAMP16422 314 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 CLCN4P51793 760 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 ELAVL2Q12926 359 aaKnown RBP17.2■□□□□ 0.34
COMMD8-202ENST00000509220 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
COMMD8-202ENST00000509220 STK38Q15208 465 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 CES5AQ6NT32 575 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 CEP120Q8N960 986 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 UROC1Q96N76 676 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 PAAF1Q9BRP4 392 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.2■□□□□ 0.34
COMMD8-202ENST00000509220 SLC38A7Q9NVC3 462 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 CITO14578 2027 aa17.2■□□□□ 0.34
COMMD8-202ENST00000509220 SMIM28A0A1B0GU29 152 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 TMEM189-UBE2V1I3L0A0 370 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 C2CD2LO14523 706 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 SPTLC2O15270 562 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 YEATS4O95619 227 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 ALADP13716 330 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 OSTNP61366 133 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 CREMQ03060 361 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 MCL1Q07820 350 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.34
COMMD8-202ENST00000509220 ZBTB45Q96K62 511 aaPredicted RBP17.19■□□□□ 0.34
COMMD8-202ENST00000509220 SNX27Q96L92 541 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 NECTIN4Q96NY8 510 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 EPHX3Q9H6B9 360 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 FNIP2Q9P278 1114 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 ANKFY1Q9P2R3 1169 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 DPP7Q9UHL4 492 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 TBX20Q9UMR3 447 aa17.19■□□□□ 0.34
COMMD8-202ENST00000509220 LOC730098B7Z3J9 87 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 K7ENM7 598 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 TEX28O15482 410 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 KIF4AO95239 1232 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 PIGRP01833 764 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 KCNE1P15382 129 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 GTF2BQ00403 316 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 KYAT1Q16773 422 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 GLRA4Q5JXX5 417 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 ATL3Q6DD88 541 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 ELMSAN1Q6PJG2 1045 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 DCLRE1AQ6PJP8 1040 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 RABGGTAQ92696 567 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 BICD1Q96G01 975 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 FBXL18Q96ME1 805 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 RIPOR3Q96MK2 946 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 FIZ1Q96SL8 496 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 ST6GALNAC4Q9H4F1 302 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 ZHX3Q9H4I2 956 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 SFXN1Q9H9B4 322 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 CNTN3Q9P232 1028 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 CACNG4Q9UBN1 327 aa17.18■□□□□ 0.34
COMMD8-202ENST00000509220 HNRNPDLO14979 420 aaKnown RBP17.17■□□□□ 0.34
COMMD8-202ENST00000509220 F13A1P00488 732 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 MTHFRP42898 656 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 LIG4P49917 911 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 UPP1Q16831 310 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 PDXDC1Q6P996 788 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 HDAC7Q8WUI4 952 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 RIN2Q8WYP3 895 aaPredicted RBP17.17■□□□□ 0.34
COMMD8-202ENST00000509220 DDX12PQ92771 950 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
COMMD8-202ENST00000509220 TTPALQ9BTX7 342 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 APOL5Q9BWW9 433 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 PLEKHA5Q9HAU0 1116 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 TFIP11Q9UBB9 837 aaKnown RBP17.17■□□□□ 0.34
COMMD8-202ENST00000509220 SEL1LQ9UBV2 794 aa17.17■□□□□ 0.34
COMMD8-202ENST00000509220 DCXO43602 365 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 B3GAT3O94766 335 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 GLUD1P00367 558 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 CLTAP09496 248 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 HARSP12081 509 aaKnown RBP17.16■□□□□ 0.34
COMMD8-202ENST00000509220 STAT6P42226 847 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.34
COMMD8-202ENST00000509220 CLCNKBP51801 687 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 SLC10A6Q3KNW5 377 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 ATAT1Q5SQI0 421 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 RARS2Q5T160 578 aaKnown RBP17.16■□□□□ 0.34
COMMD8-202ENST00000509220 FAM171A1Q5VUB5 890 aa17.16■□□□□ 0.34
COMMD8-202ENST00000509220 DYMQ7RTS9 669 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms