RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.61
RFC1-211ENST00000509084 ITIH6Q6UXX5 1313 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 RALGAPA2Q2PPJ7 1873 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 STK25O00506 426 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 STAG3L1P0CL83 205 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 FMO5P49326 533 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 MXI1P50539 228 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 CLDN10P78369 228 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 MYL7Q01449 175 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 LRRC26Q2I0M4 334 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 UBE2Q1Q7Z7E8 422 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
RFC1-211ENST00000509084 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 SEPT8Q92599 483 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 ACAP3Q96P50 834 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
RFC1-211ENST00000509084 PLEKHA5Q9HAU0 1116 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 TMEM8AQ9HCN3 771 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 C1orf112Q9NSG2 853 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
RFC1-211ENST00000509084 LRRIQ3A6PVS8 624 aaPredicted RBP11.25□□□□□ -0.61
RFC1-211ENST00000509084 XPOTO43592 962 aaKnown RBP11.25□□□□□ -0.61
RFC1-211ENST00000509084 TPM1P09493 284 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 TRIM49P0CI25 452 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 TRIM49CP0CI26 452 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 PBX1P40424 430 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 TNFSF9P41273 254 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 DSC3Q14574 896 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 UBXN11Q5T124 520 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 SPECC1LQ69YQ0 1117 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 KRT39Q6A163 491 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 GBP6Q6ZN66 633 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 VSTM4Q8IW00 320 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 DRC7Q8IY82 874 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 CEP120Q8N960 986 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 ZSWIM2Q8NEG5 633 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 CCDC127Q96BQ5 260 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 PGBD4Q96DM1 585 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 PDLIM2Q96JY6 352 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 NUP58Q9BVL2 599 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 EIF2AQ9BY44 585 aaKnown RBP11.25□□□□□ -0.61
RFC1-211ENST00000509084 UBN1Q9NPG3 1134 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 FAM105AQ9NUU6 356 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 INTS13Q9NVM9 706 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 IMPACTQ9P2X3 320 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 DERAQ9Y315 318 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 C2CD2Q9Y426 696 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 IPPQ9Y573 584 aa11.25□□□□□ -0.61
RFC1-211ENST00000509084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.25□□□□□ -0.61
RFC1-211ENST00000509084 A0A0U1RQF3 1178 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 KIAA0355O15063 1070 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 TEX33O43247 280 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 ZNF623O75123 536 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 CXCL10P02778 98 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 PFKMP08237 780 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 TMEM191BP0C7N4 346 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 CXCL8P10145 99 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 DLATP10515 647 aaKnown RBP11.24□□□□□ -0.61
RFC1-211ENST00000509084 TNNI1P19237 187 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
RFC1-211ENST00000509084 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 ENOX2Q16206 610 aaKnown RBP11.24□□□□□ -0.61
RFC1-211ENST00000509084 EXOC3L4Q17RC7 722 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 SEZ6Q53EL9 994 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 PLEKHG4Q58EX7 1191 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 FIGNQ5HY92 759 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 CACTINQ8WUQ7 758 aaKnown RBP11.24□□□□□ -0.61
RFC1-211ENST00000509084 RSPH1Q8WYR4 309 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 ANKRD36BP1Q96IX9 119 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 SNX27Q96L92 541 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 PCMTD1Q96MG8 357 aaPredicted RBP11.24□□□□□ -0.61
RFC1-211ENST00000509084 PPP1R9BQ96SB3 815 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 HTATIP2Q9BUP3 242 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 TMX1Q9H3N1 280 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
RFC1-211ENST00000509084 PDE11AQ9HCR9 933 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 RGS18Q9NS28 235 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 SNTG2Q9NY99 539 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 GIT1Q9Y2X7 761 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 PCDHB2Q9Y5E7 798 aa11.24□□□□□ -0.61
RFC1-211ENST00000509084 CENPFP49454 3210 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 TTC26A0AVF1 554 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 NBNO60934 754 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 RECQL4O94761 1208 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 TIMP1P01033 207 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 TNNC2P02585 160 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 ITGA4P13612 1032 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 RAG1P15918 1043 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 TRIM21P19474 475 aaKnown RBP11.23□□□□□ -0.61
RFC1-211ENST00000509084 RFX1P22670 979 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 GSDMDP57764 484 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 OSTNP61366 133 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 DLG4P78352 724 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 SYCP1Q15431 976 aa11.23□□□□□ -0.61
RFC1-211ENST00000509084 DUOXA2Q1HG44 320 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms