RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 CNKSR3Q6P9H4 555 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.82□□□□□ -1.32
RACK1-220ENST00000508963 INTS8Q75QN2 995 aaKnown RBP6.82□□□□□ -1.32
RACK1-220ENST00000508963 DEFB128Q7Z7B8 93 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 FAM114A1Q8IWE2 563 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 CD302Q8IX05 232 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 RPUSD2Q8IZ73 545 aaKnown RBP6.82□□□□□ -1.32
RACK1-220ENST00000508963 TMEM199Q8N511 208 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 TOP1MTQ969P6 601 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 TMEM117Q9H0C3 514 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 NDST4Q9H3R1 872 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 NXF3Q9H4D5 531 aaKnown RBP6.82□□□□□ -1.32
RACK1-220ENST00000508963 ASB7Q9H672 318 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 GRPEL1Q9HAV7 217 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 PRDM5Q9NQX1 630 aaPredicted RBP6.82□□□□□ -1.32
RACK1-220ENST00000508963 C1orf112Q9NSG2 853 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 RBAKQ9NYW8 714 aaPredicted RBP6.82□□□□□ -1.32
RACK1-220ENST00000508963 CNTN3Q9P232 1028 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 GIT1Q9Y2X7 761 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 COQ4Q9Y3A0 265 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 ALPK3Q96L96 1907 aa6.82□□□□□ -1.32
RACK1-220ENST00000508963 SMIM28A0A1B0GU29 152 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 GOLGA6L3A6NEY3 463 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 ARL5CA6NH57 179 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 LRRN2O75325 713 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 RECQL4O94761 1208 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 IL18RAPO95256 599 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 VNN1O95497 513 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 PFKMP08237 780 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 TRIM49P0CI25 452 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 TRIM49CP0CI26 452 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CXCL8P10145 99 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 ACRP10323 421 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 EPB41P11171 864 aaKnown RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 HARSP12081 509 aaKnown RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 SKIP12755 728 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 ITGA4P13612 1032 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 SYN1P17600 705 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 GTF2H1P32780 548 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 MATR3P43243 847 aaKnown RBP eCLIP6.81□□□□□ -1.32
RACK1-220ENST00000508963 FMO5P49326 533 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 RAB27AP51159 221 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 PPP2R3AQ06190 1150 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 HSP90AA2PQ14568 343 aaPredicted RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 SURF1Q15526 300 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 MAN2A1Q16706 1144 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 ZACNQ401N2 412 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CCDC40Q4G0X9 1142 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CBWD6Q4V339 395 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CBWD3Q5JTY5 395 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CLLU1OSQ5K130 101 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CBWD5Q5RIA9 395 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 RASIP1Q5U651 963 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 ZNF365Q70YC5 407 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 APBB1IPQ7Z5R6 666 aaPredicted RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 NT5DC4Q86YG4 428 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 EFCAB13Q8IY85 973 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 C7orf61Q8IZ16 206 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 TMEM130Q8N3G9 435 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 OR5B17Q8NGF7 314 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 DPF3Q92784 378 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 LPPQ93052 612 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CCDC127Q96BQ5 260 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 FAM84AQ96KN4 292 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 SNX27Q96L92 541 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 ZFP42Q96MM3 310 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 PPP1R10Q96QC0 940 aaKnown RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 TSPAN18Q96SJ8 248 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 CCDC94Q9BW85 323 aaPredicted RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 XPO4Q9C0E2 1151 aaKnown RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 VPS16Q9H269 839 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 RPF1Q9H9Y2 349 aaKnown RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 TOPORSQ9NS56 1045 aaPredicted RBP6.81□□□□□ -1.32
RACK1-220ENST00000508963 TMEM161AQ9NX61 479 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 TAB2Q9NYJ8 693 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 KLK14Q9P0G3 267 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 IFNKQ9P0W0 207 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 PLAGL2Q9UPG8 496 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 DERAQ9Y315 318 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.81□□□□□ -1.32
RACK1-220ENST00000508963 SCN5AQ14524 2016 aa6.81□□□□□ -1.32
RACK1-220ENST00000508963 ANO9A1A5B4 782 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 GTPBP10A4D1E9 387 aaKnown RBP6.8□□□□□ -1.32
RACK1-220ENST00000508963 LGALS16A8MUM7 142 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 P4HA2O15460 535 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 FGBP02675 491 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 AFPP02771 609 aaKnown RBP6.8□□□□□ -1.32
RACK1-220ENST00000508963 NFICP08651 508 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 KRT13P13646 458 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 PRKCSHP14314 528 aaPredicted RBP6.8□□□□□ -1.32
RACK1-220ENST00000508963 IGFBP6P24592 240 aaPredicted RBP6.8□□□□□ -1.32
RACK1-220ENST00000508963 MTIF2P46199 727 aaKnown RBP6.8□□□□□ -1.32
RACK1-220ENST00000508963 GCLMP48507 274 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 MRE11P49959 708 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 ZNF75DP51815 510 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 AP3M2P53677 418 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 UBASH3AP57075 661 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 TPM4P67936 248 aa6.8□□□□□ -1.32
RACK1-220ENST00000508963 FPGSQ05932 587 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms