RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 USP41Q3LFD5 358 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 ARL6IP4Q66PJ3 421 aaKnown RBP14.08□□□□□ -0.16
NR1I3-225ENST00000508387 TRIM67Q6ZTA4 783 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 USP49Q70CQ1 688 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 GPR149Q86SP6 731 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 CEP57Q86XR8 500 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 TMEM161BQ8NDZ6 487 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 CDK5RAP3Q96JB5 506 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 RIPOR3Q96MK2 946 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 ZMAT2Q96NC0 199 aaKnown RBP14.08□□□□□ -0.16
NR1I3-225ENST00000508387 REEP2Q9BRK0 252 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 MRPL4Q9BYD3 311 aaKnown RBP14.08□□□□□ -0.16
NR1I3-225ENST00000508387 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 ANKFY1Q9P2R3 1169 aa14.08□□□□□ -0.16
NR1I3-225ENST00000508387 N4BP1O75113 896 aaKnown RBP14.07□□□□□ -0.16
NR1I3-225ENST00000508387 NR1I2O75469 434 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 BRD1O95696 1058 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 MAPTP10636 758 aaKnown RBP14.07□□□□□ -0.16
NR1I3-225ENST00000508387 PLS3P13797 630 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 SYT1P21579 422 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 MARCKSP29966 332 aaPredicted RBP14.07□□□□□ -0.16
NR1I3-225ENST00000508387 PLA2G5P39877 138 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 GRM5P41594 1212 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 MCM6Q14566 821 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 PTPAQ15257 358 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 FAM171A1Q5VUB5 890 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 TDRD5Q8NAT2 981 aaKnown RBP14.07□□□□□ -0.16
NR1I3-225ENST00000508387 KREMEN2Q8NCW0 462 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 ZNF707Q96C28 371 aaPredicted RBP14.07□□□□□ -0.16
NR1I3-225ENST00000508387 ASIC4Q96FT7 647 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 SNX27Q96L92 541 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 NT5C3AQ9H0P0 336 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 STK39Q9UEW8 545 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 NR2E1Q9Y466 385 aa14.07□□□□□ -0.16
NR1I3-225ENST00000508387 SF3B1O75533 1304 aaKnown RBP eCLIP14.07□□□□□ -0.16
NR1I3-225ENST00000508387 SMIM28A0A1B0GU29 152 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 CCDC195A0A1B0GUA6 201 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 TKTP29401 623 aaKnown RBP14.06□□□□□ -0.16
NR1I3-225ENST00000508387 BRCC3P46736 316 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 CEBPZQ03701 1054 aaKnown RBP14.06□□□□□ -0.16
NR1I3-225ENST00000508387 PSMD5Q16401 504 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 ATAT1Q5SQI0 421 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 MPZL3Q6UWV2 235 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 RSPO2Q6UXX9 243 aaPredicted RBP14.06□□□□□ -0.16
NR1I3-225ENST00000508387 ST13P5Q8NFI4 369 aaPredicted RBP14.06□□□□□ -0.16
NR1I3-225ENST00000508387 LNX1Q8TBB1 728 aaPredicted RBP14.06□□□□□ -0.16
NR1I3-225ENST00000508387 C18orf25Q96B23 403 aaPredicted RBP14.06□□□□□ -0.16
NR1I3-225ENST00000508387 EPSTI1Q96J88 318 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 CLIC6Q96NY7 704 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 CLSTN3Q9BQT9 956 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 LIMD1Q9UGP4 676 aa14.06□□□□□ -0.16
NR1I3-225ENST00000508387 MTCL1Q9Y4B5 1905 aaKnown RBP14.05□□□□□ -0.16
NR1I3-225ENST00000508387 CITO14578 2027 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 UBA7P41226 1012 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 VCPP55072 806 aaKnown RBP14.05□□□□□ -0.16
NR1I3-225ENST00000508387 NCKAP1LP55160 1127 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 SPAG1Q07617 926 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 UPP1Q16831 310 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 XKR4Q5GH76 650 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 ZBTB41Q5SVQ8 909 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 LILRA6Q6PI73 481 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 ALKAL1Q6UXT8 129 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 CCDC149Q6ZUS6 474 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 SPIRE2Q8WWL2 714 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 RAD54LQ92698 747 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 TTPALQ9BTX7 342 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 TIPINQ9BVW5 301 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 TUBGCP4Q9UGJ1 667 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 FBXO2Q9UK22 296 aaPredicted RBP14.05□□□□□ -0.16
NR1I3-225ENST00000508387 MTMR6Q9Y217 621 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 SSX2IPQ9Y2D8 614 aa14.05□□□□□ -0.16
NR1I3-225ENST00000508387 B3GAT3O94766 335 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 CXCL8P10145 99 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 MCF2P10911 925 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 TNFSF9P41273 254 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 SIGLEC14Q08ET2 396 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 NOLC1Q14978 699 aaKnown RBP eCLIP14.04□□□□□ -0.16
NR1I3-225ENST00000508387 IER5LQ5T953 404 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 SMG7Q92540 1137 aaKnown RBP14.04□□□□□ -0.16
NR1I3-225ENST00000508387 PBXIP1Q96AQ6 731 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 FAM122AQ96E09 287 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 CALML4Q96GE6 196 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 DDX27Q96GQ7 796 aaKnown RBP14.04□□□□□ -0.16
NR1I3-225ENST00000508387 AK8Q96MA6 479 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 FIZ1Q96SL8 496 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 NTPCRQ9BSD7 190 aaKnown RBP14.04□□□□□ -0.16
NR1I3-225ENST00000508387 TCHPQ9BT92 498 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 CCDC94Q9BW85 323 aaPredicted RBP14.04□□□□□ -0.16
NR1I3-225ENST00000508387 IKZF4Q9H2S9 585 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 C17orf75Q9HAS0 396 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 FNIP2Q9P278 1114 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 FBXW11Q9UKB1 542 aa14.04□□□□□ -0.16
NR1I3-225ENST00000508387 RBM19Q9Y4C8 960 aaKnown RBP14.04□□□□□ -0.16
NR1I3-225ENST00000508387 TISP43B9A030 160 aa14.03□□□□□ -0.16
NR1I3-225ENST00000508387 K7ELQ4 463 aaPredicted RBP14.03□□□□□ -0.16
NR1I3-225ENST00000508387 K7ENM7 598 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms