RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 UPP2O95045 317 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 PSMC2P35998 433 aaKnown RBP11.92□□□□□ -0.5
PROM1-207ENST00000508167 FBXO47Q5MNV8 452 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 TRIM59Q8IWR1 403 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 RPF1Q9H9Y2 349 aaKnown RBP11.92□□□□□ -0.5
PROM1-207ENST00000508167 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
PROM1-207ENST00000508167 NENFQ9UMX5 172 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 INPP5FQ9Y2H2 1132 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 TRIP12Q14669 1992 aaPredicted RBP11.92□□□□□ -0.5
PROM1-207ENST00000508167 ZNF233A6NK53 670 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 ZSCAN12O43309 604 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 POU5F1BQ06416 359 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 ERCC6LQ2NKX8 1250 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 EEF1DP3Q658K8 133 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 FAM117BQ6P1L5 589 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 MPZL3Q6UWV2 235 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 ZPBP2Q6X784 338 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 ANKRD33Q7Z3H0 272 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 DBF4BQ8NFT6 615 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 RBAK-RBAKDNI3L0D1 243 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 CAND2O75155 1236 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 NDUFA10O95299 355 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
PROM1-207ENST00000508167 COL6A1P12109 1028 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 KRT9P35527 623 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 APBA1Q02410 837 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 TSHZ1Q6ZSZ6 1077 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 FAM228AQ86W67 206 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
PROM1-207ENST00000508167 LACRTQ9GZZ8 138 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 FZD8Q9H461 694 aa11.92□□□□□ -0.5
PROM1-207ENST00000508167 TSPAN1O60635 241 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 BIRC3Q13489 604 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 TMTC1Q8IUR5 882 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 GPD1LQ8N335 351 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 LINC01465Q8N7H1 131 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 ACO2Q99798 780 aaKnown RBP11.91□□□□□ -0.5
PROM1-207ENST00000508167 ST6GALNAC4Q9H4F1 302 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
PROM1-207ENST00000508167 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 CCDC175P0C221 793 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 IQCF3P0C7M6 154 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 CDCA2Q69YH5 1023 aaPredicted RBP11.91□□□□□ -0.5
PROM1-207ENST00000508167 SLC27A1Q6PCB7 646 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 UBXN6Q9BZV1 441 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 CGNQ9P2M7 1197 aaKnown RBP11.91□□□□□ -0.5
PROM1-207ENST00000508167 TRAF3IP3Q9Y228 551 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 HES2Q9Y543 173 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.91□□□□□ -0.5
PROM1-207ENST00000508167 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 CCP110O43303 1012 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
PROM1-207ENST00000508167 LPIN1Q14693 890 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 CYP26C1Q6V0L0 522 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 RPUSD2Q8IZ73 545 aaKnown RBP11.91□□□□□ -0.5
PROM1-207ENST00000508167 ACAP3Q96P50 834 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 EPC1Q9H2F5 836 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 NDST4Q9H3R1 872 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
PROM1-207ENST00000508167 PLAGL2Q9UPG8 496 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 CEP290O15078 2479 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 SCN10AQ9Y5Y9 1956 aa11.91□□□□□ -0.5
PROM1-207ENST00000508167 ACRP10323 421 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 AXLP30530 894 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 EDRF1Q3B7T1 1238 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 GANQ9H2C0 597 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 TOPORSQ9NS56 1045 aaPredicted RBP11.9□□□□□ -0.5
PROM1-207ENST00000508167 RBAKQ9NYW8 714 aaPredicted RBP11.9□□□□□ -0.5
PROM1-207ENST00000508167 SALL4Q9UJQ4 1053 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 TNFSF13BQ9Y275 285 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 TGFB1I1O43294 461 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 PPP1R37O75864 691 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 GNA14O95837 355 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 ACTN1P12814 892 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 CSF2RAP15509 400 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 HOXC8P31273 242 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 PCBP1Q15365 356 aaKnown RBP eCLIP11.9□□□□□ -0.5
PROM1-207ENST00000508167 FKBP15Q5T1M5 1219 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 KLK14Q9P0G3 267 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 HTTP42858 3142 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 OGTO15294 1046 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 CD4P01730 458 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 ITGA4P13612 1032 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 CASP4P49662 377 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 TFAMQ00059 246 aaKnown RBP11.9□□□□□ -0.5
PROM1-207ENST00000508167 CETN1Q12798 172 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 IKBKEQ14164 716 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 SNRNP35Q16560 246 aaKnown RBP11.9□□□□□ -0.5
PROM1-207ENST00000508167 DCAF4L1Q3SXM0 396 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 TAS1R3Q7RTX0 852 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 OR8K1Q8NGG5 319 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 METTL14Q9HCE5 456 aaKnown RBP11.9□□□□□ -0.5
PROM1-207ENST00000508167 KIAA1586Q9HCI6 787 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 SIX2Q9NPC8 291 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms