RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	PLEKHA4	Q9H4M7	779 aa		11.44	□□□□□ -0.58
NR1I3-222	ENST00000506018	RXFP1	Q9HBX9	757 aa		11.44	□□□□□ -0.58
NR1I3-222	ENST00000506018	MAN1C1	Q9NR34	630 aa		11.44	□□□□□ -0.58
NR1I3-222	ENST00000506018	CHST7	Q9NS84	486 aa		11.44	□□□□□ -0.58
NR1I3-222	ENST00000506018	FNIP2	Q9P278	1114 aa		11.44	□□□□□ -0.58
NR1I3-222	ENST00000506018	SORCS3	Q9UPU3	1222 aa		11.44	□□□□□ -0.58
NR1I3-222	ENST00000506018	PCDHB13	Q9Y5F0	798 aa		11.44	□□□□□ -0.58
NR1I3-222	ENST00000506018	CASTOR2	A6NHX0	329 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	C2CD4D	B7Z1M9	353 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	TEX28	O15482	410 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	TRAPPC3	O43617	180 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	CD2BP2	O95400	341 aa	Known RBP	11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	SCP2	P22307	547 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	HFE2	Q6ZVN8	426 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	C1orf186	Q6ZWK4	172 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	TAS1R1	Q7RTX1	841 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	CEP57	Q86XR8	500 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	ZDHHC14	Q8IZN3	488 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	SYT2	Q8N9I0	419 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	CMAS	Q8NFW8	434 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	RIN2	Q8WYP3	895 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	INTS4	Q96HW7	963 aa	Known RBP	11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	PRRX2	Q99811	253 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	TTPAL	Q9BTX7	342 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	RUSC1	Q9BVN2	902 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	GPR62	Q9BZJ7	368 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	PIDD1	Q9HB75	910 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	SLC38A7	Q9NVC3	462 aa		11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	LARS	Q9P2J5	1176 aa	Known RBP	11.43	□□□□□ -0.58
NR1I3-222	ENST00000506018	CCDC195	A0A1B0GUA6	201 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	TTLL13P	A6NNM8	815 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	PTGES	O14684	152 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	EFEMP2	O95967	443 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	WEE2	P0C1S8	567 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	PLA2G4B	P0C869	781 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	MCF2	P10911	925 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	PDIA4	P13667	645 aa	Known RBP	11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	PLS3	P13797	630 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	ABCD1	P33897	745 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	GRM5	P41594	1212 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	IL17A	Q16552	155 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	NT5DC1	Q5TFE4	455 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	FAM171A1	Q5VUB5	890 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	EEF1DP3	Q658K8	133 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	SPIRE2	Q8WWL2	714 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	ACO2	Q99798	780 aa	Known RBP	11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	MMTAG2	Q9BU76	263 aa	Known RBP	11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	RHOBTB2	Q9BYZ6	727 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	POLD4	Q9HCU8	107 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	ZDHHC7	Q9NXF8	308 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	ARHGAP28	Q9P2N2	729 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	ZNF318	Q5VUA4	2279 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	PDCD11	Q14690	1871 aa	Known RBP	11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	VWA8	A3KMH1	1905 aa		11.42	□□□□□ -0.58
NR1I3-222	ENST00000506018	VPS37C	A5D8V6	355 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	RIOK3	O14730	519 aa	Known RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	SLC16A4	O15374	487 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	B3GAT3	O94766	335 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	KIF4A	O95239	1232 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	KRT18	P05783	430 aa	Known RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	LONP1	P36776	959 aa	Known RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	MATR3	P43243	847 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	PSMD5	Q16401	504 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	LIN9	Q5TKA1	542 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	DCLRE1A	Q6PJP8	1040 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	MPZL3	Q6UWV2	235 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	PALB2	Q86YC2	1186 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	FBXL6	Q8N531	539 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	KREMEN2	Q8NCW0	462 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	HASPIN	Q8TF76	798 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	PIK3R5	Q8WYR1	880 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	SMG7	Q92540	1137 aa	Known RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	RABGGTA	Q92696	567 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	RNF25	Q96BH1	459 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	BICD1	Q96G01	975 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	DDX27	Q96GQ7	796 aa	Known RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	ACAP3	Q96P50	834 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	PLIN2	Q99541	437 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	NTPCR	Q9BSD7	190 aa	Known RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	CDH22	Q9UJ99	828 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	ODF2L	Q9ULJ1	636 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	USP20	Q9Y2K6	914 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	MUC6	Q6W4X9	2439 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	SFI1	A8K8P3	1242 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018		F8W810	466 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	TMEM189-UBE2V1	I3L0A0	370 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	TGM5	O43548	720 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	TOM1L1	O75674	476 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	EDN1	P05305	212 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	TXLNA	P40222	546 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	SLC12A3	P55017	1021 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	RAD51AP2	Q09MP3	1159 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	KYAT1	Q16773	422 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	TMEM119	Q4V9L6	283 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	GLRA4	Q5JXX5	417 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	KANK3	Q6NY19	840 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	ZPBP2	Q6X784	338 aa		11.41	□□□□□ -0.58
NR1I3-222	ENST00000506018	KCNK18	Q7Z418	384 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms