RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 C17orf75Q9HAS0 396 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.26□□□□□ -0.299e-8■■■■■ 27
PDLIM7-214ENST00000505746 EPS15L1Q9UBC2 864 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 KCNG1Q9UIX4 513 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 DUSP12Q9UNI6 340 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 TRAPPC3O43617 180 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 ZMYND10O75800 440 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 B3GAT3O94766 335 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 EDN1P05305 212 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 DMP1Q13316 513 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 PSMD5Q16401 504 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 LIN9Q5TKA1 542 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 CLSTN3Q9BQT9 956 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 TIPINQ9BVW5 301 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 CCDC94Q9BW85 323 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 MRPL4Q9BYD3 311 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 UPF2Q9HAU5 1272 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 TOPORSQ9NS56 1045 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 FBXL21Q9UKT6 434 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 MUC6Q6W4X9 2439 aa13.25□□□□□ -0.29
PDLIM7-214ENST00000505746 PP2D1A8MPX8 630 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 H3BQV1 296 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 TMEM189-UBE2V1I3L0A0 370 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 N4BP1O75113 896 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 HIP1RO75146 1068 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 HNRNPA1P09651 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 GRM5P41594 1212 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 IL17AQ16552 155 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 GLRA4Q5JXX5 417 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 RINT1Q6NUQ1 792 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 C1orf186Q6ZWK4 172 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 TMEM105Q8N8V8 129 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 FLCNQ8NFG4 579 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 PPP1R10Q96QC0 940 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 MYADMQ96S97 322 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 PHOX2BQ99453 314 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 TCHPQ9BT92 498 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 CXCL16Q9H2A7 254 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 PTPRHQ9HD43 1115 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 ARHGAP28Q9P2N2 729 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 FBXW11Q9UKB1 542 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 ZFP37Q9Y6Q3 630 aaPredicted RBP13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 TRIOO75962 3097 aa13.24□□□□□ -0.29
PDLIM7-214ENST00000505746 SMIM28A0A1B0GU29 152 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 H0Y858 1186 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 C8AP07357 584 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 LAMP2P13473 410 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 FGFR3P22607 806 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 GUCY2CP25092 1073 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 CDC25AP30304 524 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 HOXA9P31269 272 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 MCM2P49736 904 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 CLCNKBP51801 687 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 ATP2C1P98194 919 aaPredicted RBP13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 STRN3Q13033 797 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 RAB33AQ14088 237 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 ZRSR1Q15695 479 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 UPP1Q16831 310 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 ZNF568Q3ZCX4 644 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 XKR4Q5GH76 650 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 PPM1LQ5SGD2 360 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 GET4Q7L5D6 327 aaPredicted RBP13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 DAW1Q8N136 415 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 CDK5RAP3Q96JB5 506 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 ACAP3Q96P50 834 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 NTPCRQ9BSD7 190 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 MMTAG2Q9BU76 263 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 RUSC1Q9BVN2 902 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 TARS2Q9BW92 718 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 CDT1Q9H211 546 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 SLC38A7Q9NVC3 462 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 WNT16Q9UBV4 365 aa13.23□□□□□ -0.29
PDLIM7-214ENST00000505746 SFI1A8K8P3 1242 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 XYLBO75191 536 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 MCF2P10911 925 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 AOC1P19801 751 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 FSHRP23945 695 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 GJB2P29033 226 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 OR1D2P34982 312 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 SMTNP53814 917 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 OSTNP61366 133 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 MAPK7Q13164 816 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 UVSSAQ2YD98 709 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 HYIQ5T013 277 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 ARL6IP4Q66PJ3 421 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 ANKS3Q6ZW76 656 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 RTL10Q7L3V2 364 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 GRASPQ7Z6J2 395 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 SIX5Q8N196 739 aa13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 SYT2Q8N9I0 419 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-214ENST00000505746 SPIRE2Q8WWL2 714 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms