RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 ASXL3Q9C0F0 2248 aa4.82□□□□□ -1.64
CPNE4-204ENST00000505331 SPTAN1Q13813 2472 aaKnown RBP4.82□□□□□ -1.64
CPNE4-204ENST00000505331 NID2Q14112 1375 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 BLACEA4D250 179 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 FAM149AA5PLN7 773 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 PLK4O00444 970 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 SUV39H1O43463 412 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 GJB3O75712 270 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 DDHD2O94830 711 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 RHOP08100 348 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 SYPP08247 313 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 SNHG28P0DPA3 235 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 CEBPBP17676 345 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 GNAT2P19087 354 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 BCKDHBP21953 392 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 EIF4BP23588 611 aaKnown RBP4.81□□□□□ -1.64
CPNE4-204ENST00000505331 TNFRSF8P28908 595 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 PHKA2P46019 1235 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 DGKEP52429 567 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 MRPS9P82933 396 aaKnown RBP4.81□□□□□ -1.64
CPNE4-204ENST00000505331 BECN1Q14457 450 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 NFKBIBQ15653 356 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 SLC5A9Q2M3M2 681 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 USP41Q3LFD5 358 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 C6orf118Q5T5N4 469 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 ARHGAP40Q5TG30 622 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 BROXQ5VW32 411 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 SYT13Q7L8C5 426 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 PLPPR4Q7Z2D5 763 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 NLRX1Q86UT6 975 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 GLYCTKQ8IVS8 523 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 YAF2Q8IY57 180 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 EXOC6Q8TAG9 804 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 SLC7A14Q8TBB6 771 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 TMEM176AQ96HP8 235 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 TMEM209Q96SK2 561 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 PPP1R16BQ96T49 567 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 TMEM47Q9BQJ4 181 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 API5Q9BZZ5 524 aaKnown RBP4.81□□□□□ -1.64
CPNE4-204ENST00000505331 TRPV4Q9HBA0 871 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 CAPN10Q9HC96 672 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 EPB41L4AQ9HCS5 686 aaPredicted RBP4.81□□□□□ -1.64
CPNE4-204ENST00000505331 FSCN3Q9NQT6 498 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 PAG1Q9NWQ8 432 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 MARCH5Q9NX47 278 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 TOR4AQ9NXH8 423 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 RTEL1Q9NZ71 1219 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 PILRBQ9UKJ0 227 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 PCOLCE2Q9UKZ9 415 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 INVSQ9Y283 1065 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 NOTCH2Q04721 2471 aa4.81□□□□□ -1.64
CPNE4-204ENST00000505331 C2orf16Q68DN1 1984 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 WDR27A2RRH5 827 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 BHMG1C9JSJ3 638 aaPredicted RBP4.8□□□□□ -1.64
CPNE4-204ENST00000505331 ZNF197O14709 1029 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 OPLAHO14841 1288 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 NR1I2O75469 434 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 CHGBP05060 677 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 APPP05067 770 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 KRT10P13645 584 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 HOXA13P31271 388 aaPredicted RBP4.8□□□□□ -1.64
CPNE4-204ENST00000505331 PTGER3P43115 390 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 SLC26A2P50443 739 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 FCHO2Q0JRZ9 810 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 CCDC173Q0VFZ6 552 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 GRSF1Q12849 480 aaKnown RBP eCLIP4.8□□□□□ -1.64
CPNE4-204ENST00000505331 GRM4Q14833 912 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 PTPAQ15257 358 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 QRICH1Q2TAL8 776 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 ALDH1L2Q3SY69 923 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 LYSMD4Q5XG99 296 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 LMBRD2Q68DH5 695 aaPredicted RBP4.8□□□□□ -1.64
CPNE4-204ENST00000505331 HIST2H2BCQ6DN03 193 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 TMPRSS12Q86WS5 348 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 TICAM1Q8IUC6 712 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 HS6ST3Q8IZP7 471 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 ZNF454Q8N9F8 522 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 SSH3Q8TE77 659 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 SNRNP27Q8WVK2 155 aaKnown RBP4.8□□□□□ -1.64
CPNE4-204ENST00000505331 LPPQ93052 612 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 OSBP2Q969R2 916 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 PGBD4Q96DM1 585 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 POM121Q96HA1 1249 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 CDHR1Q96JP9 859 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 PCYT2Q99447 389 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 CDC6Q99741 560 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 AMNQ9BXJ7 453 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 NACAP1Q9BZK3 213 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 NRSN2Q9GZP1 204 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 UBA5Q9GZZ9 404 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 PLEKHB1Q9UF11 243 aaPredicted RBP4.8□□□□□ -1.64
CPNE4-204ENST00000505331 PRG3Q9Y2Y8 225 aaPredicted RBP4.8□□□□□ -1.64
CPNE4-204ENST00000505331 AK5Q9Y6K8 562 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 C2CD3Q4AC94 2353 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 APC2O95996 2303 aa4.8□□□□□ -1.64
CPNE4-204ENST00000505331 ATMQ13315 3056 aa4.79□□□□□ -1.64
CPNE4-204ENST00000505331 URB1O60287 2271 aaKnown RBP4.79□□□□□ -1.64
CPNE4-204ENST00000505331 RALGAPA1Q6GYQ0 2036 aa4.79□□□□□ -1.64
CPNE4-204ENST00000505331 HEPACAM2A8MVW5 462 aa4.79□□□□□ -1.64
CPNE4-204ENST00000505331 PATL2C9JE40 543 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms