RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 WDR78Q5VTH9 848 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 KLHL7Q8IXQ5 586 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 DDX1Q92499 740 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 DHX38Q92620 1227 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 CAVIN3Q969G5 261 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 SPATA33Q96N06 139 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 RPS6KC1Q96S38 1066 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 NAP1L3Q99457 506 aaPredicted RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 IGKV6-21A0A0C4DH24 114 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 DRP2Q13474 957 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 BIRC3Q13489 604 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 EAPPQ56P03 285 aaPredicted RBP16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 TDRD10Q5VZ19 366 aaKnown RBP16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 ACAD10Q6JQN1 1059 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 SND1Q7KZF4 910 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 ZNF677Q86XU0 584 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 EIF1ADQ8N9N8 165 aaKnown RBP16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 GDAP1L1Q96MZ0 367 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 CGRRF1Q99675 332 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 MRPL4Q9BYD3 311 aaKnown RBP16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 SMARCAD1Q9H4L7 1026 aa16.58■□□□□ 0.24
SNCAIP-207ENST00000504884 RAD51CO43502 376 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 CYP1A2P05177 515 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 TXNP10599 105 aaKnown RBP16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 MARK3P27448 753 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 PIK3CAP42336 1068 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 AP3M2P53677 418 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 LAMTOR4Q0VGL1 99 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 PAK2Q13177 524 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 TTLL4Q14679 1199 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 ZBTB8OSQ8IWT0 167 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 FBXO16Q8IX29 292 aaPredicted RBP16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 AP1M1Q9BXS5 423 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 C2orf40Q9H1Z8 148 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 TAF1DQ9H5J8 278 aaPredicted RBP16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 UVRAGQ9P2Y5 699 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 GTF3C4Q9UKN8 822 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
SNCAIP-207ENST00000504884 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 MSCO60682 206 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 TOM1L1O75674 476 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 GJA5P36382 358 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 WNT7BP56706 349 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 PLCB4Q15147 1175 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 PPP2R5EQ16537 467 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 LMBRD2Q68DH5 695 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CDCA2Q69YH5 1023 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 UBL4BQ8N7F7 174 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CCDC26Q8TAB7 109 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 SLITRK6Q9H5Y7 841 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CNTNAP2Q9UHC6 1331 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 SIP14410 1827 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 ZBTB42B2RXF5 422 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 SART1O43290 800 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 HBP1O60381 514 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CLSTN1O94985 981 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 VNN1O95497 513 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 EDN1P05305 212 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 SRGAP2CP0DJJ0 459 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CARSP49589 748 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CCNA1P78396 465 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 GRM1Q13255 1194 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 MAPK6Q16659 721 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CLEC16AQ2KHT3 1053 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 MAATS1Q7Z4T9 603 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 GPRC5AQ8NFJ5 357 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 IFT81Q8WYA0 676 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 ACO2Q99798 780 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 TCHPQ9BT92 498 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 CCDC113Q9H0I3 377 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 LRRC37A2A6NM11 1700 aa16.56■□□□□ 0.24
SNCAIP-207ENST00000504884 SYF2O95926 243 aaKnown RBP16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 FGGP02679 453 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 TBXAS1P24557 533 aaPredicted RBP16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 MESDQ14696 234 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 ZBTB41Q5SVQ8 909 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 ZNF771Q7L3S4 317 aaPredicted RBP16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 ELMO3Q96BJ8 720 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 WNT8AQ9H1J5 351 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 EFCC1Q9HA90 598 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 VPS18Q9P253 973 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 ADAM21Q9UKJ8 722 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 PTPRJQ12913 1337 aa16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
SNCAIP-207ENST00000504884 FAM170AA1A519 330 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 GOLGA6BA6NDN3 693 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 ASAP2O43150 1006 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 PHACTR2O75167 634 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 CUL2Q13617 745 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 TFDP1Q14186 410 aa16.54■□□□□ 0.24
SNCAIP-207ENST00000504884 SURF1Q15526 300 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms