RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 OLIG1Q8TAK6 271 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 KREMEN1Q96MU8 473 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 POP1Q99575 1024 aaKnown RBP14.35□□□□□ -0.11
LMNA-220ENST00000504687 MTG1Q9BT17 334 aaPredicted RBP14.35□□□□□ -0.11
LMNA-220ENST00000504687 TCHPQ9BT92 498 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 LACRTQ9GZZ8 138 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 SPC25Q9HBM1 224 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 PDE11AQ9HCR9 933 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 SETD4Q9NVD3 440 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 NAGPAQ9UK23 515 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 A0A0A6YYK5 440 aaPredicted RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 A0A0U1RQJ8 604 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 RCCD1A6NED2 376 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 FOXN3O00409 490 aaPredicted RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 CTIFO43310 598 aaKnown RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 VNN1O95497 513 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 TNNI1P19237 187 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 MATR3P43243 847 aaKnown RBP eCLIP14.34□□□□□ -0.11
LMNA-220ENST00000504687 CYP27A1Q02318 531 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 PRKCZQ05513 592 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 GFPT1Q06210 699 aaPredicted RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 MAP3K21Q5TCX8 1036 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 TDRD10Q5VZ19 366 aaKnown RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 RPAINQ86UA6 219 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 CD302Q8IX05 232 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 TRIM58Q8NG06 486 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 PXYLP1Q8TE99 480 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 UBE2Q2Q8WVN8 375 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 ATRIPQ8WXE1 791 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 CALR3Q96L12 384 aaKnown RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 GCOM2Q9BZD3 368 aaPredicted RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 ARHGAP39Q9C0H5 1083 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 PDZD7Q9H5P4 517 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 FAM124BQ9H5Z6 455 aaPredicted RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 ASB7Q9H672 318 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 TOPORSQ9NS56 1045 aaPredicted RBP14.34□□□□□ -0.11
LMNA-220ENST00000504687 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 ADAMTS1Q9UHI8 967 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 CNTN6Q9UQ52 1028 aa14.34□□□□□ -0.11
LMNA-220ENST00000504687 B4GALT5O43286 388 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 TSPAN1O60635 241 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 ADAMTS4O75173 837 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 HLA-DRAP01903 254 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 VTNP04004 478 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 MYL3P08590 195 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 RARBP10826 455 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 CYP2C9P11712 490 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
LMNA-220ENST00000504687 TBXAS1P24557 533 aaPredicted RBP14.33□□□□□ -0.12
LMNA-220ENST00000504687 PRMT2P55345 433 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 WNT7BP56706 349 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 TCEAL1Q15170 157 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 ENOX2Q16206 610 aaKnown RBP14.33□□□□□ -0.12
LMNA-220ENST00000504687 DUOXA2Q1HG44 320 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 DCAF4L1Q3SXM0 396 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 WDR44Q5JSH3 913 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 ZNF569Q5MCW4 686 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 EEF1DP3Q658K8 133 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 ALKBH5Q6P6C2 394 aaKnown RBP14.33□□□□□ -0.12
LMNA-220ENST00000504687 KLHDC9Q8NEP7 349 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 NLRP7Q8WX94 980 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 TAF4BQ92750 862 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 SECISBP2LQ93073 1101 aaKnown RBP14.33□□□□□ -0.12
LMNA-220ENST00000504687 TSPAN18Q96SJ8 248 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 C1orf112Q9NSG2 853 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 RNF186Q9NXI6 227 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 SAGE1Q9NXZ1 904 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 PTPRJQ12913 1337 aa14.33□□□□□ -0.12
LMNA-220ENST00000504687 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 CTAGE9A4FU28 777 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 GPR25O00155 361 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 DDX3XO00571 662 aaKnown RBP eCLIP14.32□□□□□ -0.12
LMNA-220ENST00000504687 ERLIN2O94905 339 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 ABL1P00519 1130 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 ASS1P00966 412 aaKnown RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 GZMAP12544 262 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 DARSP14868 501 aaKnown RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 TNFSF9P41273 254 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 CACNB2Q08289 660 aaPredicted RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 ARHGEF6Q15052 776 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 CCSAPQ6IQ19 270 aaPredicted RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 ZNF677Q86XU0 584 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 SLC35F6Q8N357 371 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 PPM1KQ8N3J5 372 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 LENG1Q96BZ8 264 aaPredicted RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 ZBTB10Q96DT7 871 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 NAPGQ99747 312 aaPredicted RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 ADPGKQ9BRR6 497 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 IRX2Q9BZI1 471 aaPredicted RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 RPF1Q9H9Y2 349 aaKnown RBP14.32□□□□□ -0.12
LMNA-220ENST00000504687 GUCA1BQ9UMX6 200 aa14.32□□□□□ -0.12
LMNA-220ENST00000504687 TBC1D8O95759 1140 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 HMGCRP04035 888 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 PRLRP16471 622 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 EIF4BP23588 611 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms