RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 DDX25Q9UHL0 483 aaKnown RBP10.1□□□□□ -0.79
DHFR-202ENST00000504396 SIT1Q9Y3P8 196 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 CYP3A7-CYP3A51PA0A087WV96 503 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 CDC45O75419 566 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 STBD1O95210 358 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 C1RP00736 705 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 TIMP2P16035 220 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 CYP3A7P24462 503 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 SCNN1GP51170 649 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 NCBP1Q09161 790 aaKnown RBP10.09□□□□□ -0.79
DHFR-202ENST00000504396 PCBP1Q15365 356 aaKnown RBP eCLIP10.09□□□□□ -0.79
DHFR-202ENST00000504396 NTRK3Q16288 839 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 DCLRE1AQ6PJP8 1040 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 B3GNT9Q6UX72 402 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 TAS1R1Q7RTX1 841 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 SRGAP1Q7Z6B7 1085 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 SKAP1Q86WV1 359 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 RNF149Q8NC42 400 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 CNNM3Q8NE01 707 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 PRPF31Q8WWY3 499 aaKnown RBP10.09□□□□□ -0.79
DHFR-202ENST00000504396 CEP89Q96ST8 783 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 GAD1Q99259 594 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 MINDY3Q9H8M7 445 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 UBN1Q9NPG3 1134 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 EPS15L1Q9UBC2 864 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 PCDHA4Q9UN74 947 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 MAP4K5Q9Y4K4 846 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 IPPQ9Y573 584 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 TDRD15B5MCY1 1934 aaKnown RBP10.09□□□□□ -0.79
DHFR-202ENST00000504396 SPTBN4Q9H254 2564 aa10.09□□□□□ -0.79
DHFR-202ENST00000504396 MED19A0JLT2 244 aaPredicted RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 ARL5CA6NH57 179 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 F8W810 466 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 CPLX1O14810 134 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 EDIL3O43854 480 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 PSMA5P28066 241 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 EVCP57679 992 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 PTK2Q05397 1052 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 SSRP1Q08945 709 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 LAMTOR4Q0VGL1 99 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 EMC2Q15006 297 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 INF2Q27J81 1249 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 UBXN11Q5T124 520 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 GALNT17Q6IS24 598 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 NOTUMQ6P988 496 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 TRIM46Q7Z4K8 759 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 MRPL10Q7Z7H8 261 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 COLGALT2Q8IYK4 626 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 HACE1Q8IYU2 909 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 BLIDQ8IZY5 108 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 ETNPPLQ8TBG4 499 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 TCP11Q8WWU5 503 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 NXPE3Q969Y0 559 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 CPB2Q96IY4 423 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 CCDC43Q96MW1 224 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 MBOAT7Q96N66 472 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 COLEC11Q9BWP8 271 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 KLF16Q9BXK1 252 aaPredicted RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 EIF2AQ9BY44 585 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 FOXQ1Q9C009 403 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 POLIQ9UNA4 740 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 HES2Q9Y543 173 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 NUMBLQ9Y6R0 609 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 MTCL1Q9Y4B5 1905 aaKnown RBP10.08□□□□□ -0.8
DHFR-202ENST00000504396 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
DHFR-202ENST00000504396 INO80B-WBP1J3KQ70 363 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 EML1O00423 815 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 TGM5O43548 720 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 SLC37A4O43826 429 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 SP9P0CG40 484 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 LAMP2P13473 410 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 RPL17P18621 184 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 RPS6KB1P23443 525 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 DSG1Q02413 1049 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 XKR9Q5GH70 373 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 NCAPH2Q6IBW4 605 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 C1orf210Q8IVY1 113 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 GPR65Q8IYL9 337 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 DAGLBQ8NCG7 672 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 HDAC7Q8WUI4 952 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 RUBCNQ92622 972 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 RABGGTAQ92696 567 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 ZNF707Q96C28 371 aaPredicted RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 ZFP42Q96MM3 310 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 LXNQ9BS40 222 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 NT5C3AQ9H0P0 336 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 PLEKHA4Q9H4M7 779 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 ZFAND3Q9H8U3 227 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 SPATA6Q9NWH7 488 aaPredicted RBP10.07□□□□□ -0.8
DHFR-202ENST00000504396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.07□□□□□ -0.8
DHFR-202ENST00000504396 NCDNQ9UBB6 729 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 MIA3Q5JRA6 1907 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 CCDC194A0A1B0GVG4 234 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 ASAP2O43150 1006 aa10.07□□□□□ -0.8
DHFR-202ENST00000504396 TSPAN1O60635 241 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms