RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 RGS17Q9UGC6 210 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-204ENST00000504131 ABCC2Q92887 1545 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 EPRSP07814 1512 aaKnown RBP6.59□□□□□ -1.35
CLCN3-204ENST00000504131 LRPPRCP42704 1394 aaKnown RBP6.59□□□□□ -1.35
CLCN3-204ENST00000504131 PTPRCP08575 1304 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 KANSL1LA0AUZ9 987 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 BRINP1O60477 761 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 ATP6V1G2O95670 118 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 CHRNB1P11230 501 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 IDUAP35475 653 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 STAT6P42226 847 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 RNF4P78317 190 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 TAP1Q03518 808 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 CACNB2Q08289 660 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-204ENST00000504131 ZNF211Q13398 564 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-204ENST00000504131 PPA1Q15181 289 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 AADACL4Q5VUY2 407 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 MPRIPQ6WCQ1 1025 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC149Q6ZUS6 474 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 KRT77Q7Z794 578 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 NOSTRINQ8IVI9 506 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 PM20D2Q8IYS1 436 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 TERB1Q8NA31 727 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 SYTL5Q8TDW5 730 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-204ENST00000504131 TUBGCP5Q96RT8 1024 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 CD209Q9NNX6 404 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 MIA2Q96PC5 1412 aa6.59□□□□□ -1.35
CLCN3-204ENST00000504131 OR6C65A6NJZ3 312 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 PSMD9O00233 223 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 TOMM70O94826 608 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 CCNDBP1O95273 360 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 CD2BP2O95400 341 aaKnown RBP6.59□□□□□ -1.36
CLCN3-204ENST00000504131 OSBPP22059 807 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 DDX6P26196 483 aaKnown RBP eCLIP6.59□□□□□ -1.361e-6■□□□□ 10.9
CLCN3-204ENST00000504131 KCNJ5P48544 419 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 USP11P51784 963 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 CASP5P51878 434 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 ATP8B2P98198 1209 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 RIPK1Q13546 671 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 DSG2Q14126 1118 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 C16orf72Q14CZ0 275 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 ZSCAN25Q6NSZ9 544 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 BLOC1S2Q6QNY1 142 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF467Q7Z7K2 595 aaPredicted RBP6.59□□□□□ -1.36
CLCN3-204ENST00000504131 STARD8Q92502 1023 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 SMARCAD1Q9H4L7 1026 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 NTN4Q9HB63 628 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 PHF24Q9UPV7 400 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 EHBP1L1Q8N3D4 1523 aa6.59□□□□□ -1.36
CLCN3-204ENST00000504131 ARHGAP42A6NI28 874 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TXNL1O43396 289 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ZBTB14O43829 449 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ZPR1O75312 459 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CCNKO75909 580 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SMNDC1O75940 238 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 KRT36O76013 467 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 FARP2O94887 1054 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NPTXRO95502 500 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 UBTFL6P0CB48 400 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ADSLP30566 484 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CCT3P49368 545 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 RPP30P78346 268 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MAP3K12Q12852 859 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TUBB2AQ13885 445 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 AARS2Q5JTZ9 985 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PLCZ1Q86YW0 608 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 GRIN3AQ8TCU5 1115 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 RNF34Q969K3 372 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 DEPDC7Q96QD5 511 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PRAM1Q96QH2 718 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TUBB2BQ9BVA1 445 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 RUVBL1Q9Y265 456 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 KLHL20Q9Y2M5 609 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 COPG1Q9Y678 874 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MICAL2O94851 1124 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SNAP29O95721 258 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NPTX2P47972 431 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NFKB2Q00653 900 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TMEM62Q0P6H9 643 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TRIP13Q15645 432 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SGO1Q5FBB7 561 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ARHGAP11AQ6P4F7 1023 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 C4orf22Q6V702 233 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 GIPC3Q8TF64 312 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 TIFAQ96CG3 184 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MTFMTQ96DP5 389 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 SIPA1Q96FS4 1042 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 EMILIN2Q9BXX0 1053 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 L1RE1Q9UN81 338 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 ARHGAP26Q9UNA1 814 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NCOA1Q15788 1441 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NCF1BA6NI72 391 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 A8MVJ9 347 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 NCF1CA8MVU1 366 aaPredicted RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 CTNND1O60716 968 aaKnown RBP6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PPP6R2O75170 966 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 RGS20O76081 388 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 MFN2O95140 757 aa6.58□□□□□ -1.36
CLCN3-204ENST00000504131 PENKP01210 267 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms