RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MFSD5Q6N075 450 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MIS18BP1Q6P0N0 1132 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 C11orf57Q6ZUT1 292 aaPredicted RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 TC2NQ8N9U0 490 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 RBM46Q8TBY0 533 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 SMCR8Q8TEV9 937 aaPredicted RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 SCFD2Q8WU76 684 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SEC62Q99442 399 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 SLF1Q9BQI6 1058 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 CENPKQ9BS16 269 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 BCO2Q9BYV7 579 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 EPB41L1Q9H4G0 881 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 A0A087X0B3 334 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 A0A1B0GTQ1 180 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GRID2IPA4D2P6 1211 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SPATA31C2B4DYI2 1134 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PFDN1O60925 122 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CBFA2T3O75081 653 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF189O75820 626 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ECM2O94769 699 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PARNO95453 639 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 F2P00734 622 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 POLR2EP19388 210 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 RGS2P41220 211 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SLC44A4Q53GD3 710 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC122Q5T0U0 273 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 RINLQ6ZS11 566 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GPR155Q7Z3F1 870 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 RALYLQ86SE5 291 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SLC35F6Q8N357 371 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 FAM212AQ96EL1 285 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 USP28Q96RU2 1077 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 XYLT2Q9H1B5 865 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF408Q9H9D4 720 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 DDX25Q9UHL0 483 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PUF60Q9UHX1 559 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 NOCTQ9UK39 431 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 C19orf81C9J6K1 198 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 H7C1D1 291 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ASAP2O43150 1006 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 IGLV3-27P01718 113 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CYP1A1P04798 512 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CYP11A1P05108 521 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ALADP13716 330 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ARL2P36404 184 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PCYT1AP49585 367 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 NMIQ13287 307 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PDCLQ13371 301 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 KRT72Q14CN4 511 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC6Q16204 474 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 RAB41Q5JT25 222 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TPTE2Q6XPS3 522 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 BZW1Q7L1Q6 419 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TRAPPC11Q7Z392 1133 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PCGF5Q86SE9 256 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 HPS3Q969F9 1004 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TEKT1Q969V4 418 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CYFIP2Q96F07 1278 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC42Q96M95 316 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 UIMC1Q96RL1 719 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC77Q9BR77 488 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 EIF2AQ9BY44 585 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PUS3Q9BZE2 481 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 FTOQ9C0B1 505 aaKnown RBP eCLIP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PPCSQ9HAB8 311 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 HDAC9Q9UKV0 1011 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 BLOC1S6Q9UL45 172 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PCDHGC3Q9UN70 934 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF652Q9Y2D9 606 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CACNA1EQ15878 2313 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 MATN2O00339 956 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 WDR46O15213 610 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GAS8O95995 478 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GNAT1P11488 350 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ATP6V1C1P21283 382 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 GARTP22102 1010 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CDC27P30260 824 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ZBED6P86452 979 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 KCNA1Q09470 495 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CYLC2Q14093 348 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 DPCR1Q3MIW9 517 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC153Q494R4 210 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ANKRD20A2Q5SQ80 823 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ANKRD20A1Q5TYW2 823 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ANKRD20A3Q5VUR7 823 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 DAB2IPQ5VWQ8 1189 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TDRPQ86YL5 185 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 CROCCP3Q8IVE0 287 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 ARMC10Q8N2F6 343 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 KRI1Q8N9T8 703 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SUPT20HQ8NEM7 779 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 AENQ8WTP8 325 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PGM2Q96G03 612 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 DDX27Q96GQ7 796 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 XPO6Q96QU8 1125 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 KLC2Q9H0B6 622 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 SLC12A6Q9UHW9 1150 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PA2G4Q9UQ80 394 aaKnown RBP2.99□□□□□ -1.93
NEDD4-204ENST00000503468 TICRRQ7Z2Z1 1910 aa2.99□□□□□ -1.93
NEDD4-204ENST00000503468 PARP1P09874 1014 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms