RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 CNPP09543 421 aaKnown RBP13.16□□□□□ -0.3
SYNE4-206ENST00000503121 EPCAMP16422 314 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 SCP2P22307 547 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 LIG4P49917 911 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 ZP2Q05996 745 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.3
SYNE4-206ENST00000503121 USP41Q3LFD5 358 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 TPRNQ4KMQ1 711 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 CES5AQ6NT32 575 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 SYCE2Q6PIF2 218 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 PDILTQ8N807 584 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 HASPINQ8TF76 798 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 B3GALT6Q96L58 329 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 POP1Q99575 1024 aaKnown RBP13.16□□□□□ -0.3
SYNE4-206ENST00000503121 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 TBX20Q9UMR3 447 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 MYH11P35749 1972 aa13.16□□□□□ -0.3
SYNE4-206ENST00000503121 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 MYMKA6NI61 221 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 ABLIM1O14639 778 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
SYNE4-206ENST00000503121 LILRB3O75022 631 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 KIF4AO95239 1232 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 BRD1O95696 1058 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 NMT1P30419 496 aaKnown RBP13.15□□□□□ -0.3
SYNE4-206ENST00000503121 ABCD1P33897 745 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 PKP1Q13835 747 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 NAB2Q15742 525 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 SEZ6Q53EL9 994 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 KIAA0319Q5VV43 1072 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 CEP57Q86XR8 500 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 SLC22A17Q8WUG5 538 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 RIN2Q8WYP3 895 aaPredicted RBP13.15□□□□□ -0.3
SYNE4-206ENST00000503121 DDX12PQ92771 950 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 PPP1R10Q96QC0 940 aaKnown RBP13.15□□□□□ -0.3
SYNE4-206ENST00000503121 S1PR5Q9H228 398 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 DZANK1Q9NVP4 752 aa13.15□□□□□ -0.3
SYNE4-206ENST00000503121 SF3B1O75533 1304 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNE4-206ENST00000503121 TEX28O15482 410 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 CUTAO60888 179 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 B3GAT3O94766 335 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 EFEMP2O95967 443 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 ADH1AP07327 375 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 IDEP14735 1019 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 DSG1Q02413 1049 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 ITIH3Q06033 890 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 MCL1Q07820 350 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
SYNE4-206ENST00000503121 ZC2HC1CQ53FD0 456 aaPredicted RBP13.14□□□□□ -0.31
SYNE4-206ENST00000503121 RARS2Q5T160 578 aaKnown RBP13.14□□□□□ -0.31
SYNE4-206ENST00000503121 FAM171A1Q5VUB5 890 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 ATL3Q6DD88 541 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 DCLRE1AQ6PJP8 1040 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 ALKAL1Q6UXT8 129 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 RNF168Q8IYW5 571 aaPredicted RBP13.14□□□□□ -0.31
SYNE4-206ENST00000503121 C12orf76Q8N812 135 aaPredicted RBP13.14□□□□□ -0.31
SYNE4-206ENST00000503121 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 KCNN1Q92952 543 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 SNX27Q96L92 541 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 UROC1Q96N76 676 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 PHF7Q9BWX1 381 aaPredicted RBP13.14□□□□□ -0.31
SYNE4-206ENST00000503121 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 EPHX3Q9H6B9 360 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 RXFP1Q9HBX9 757 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
SYNE4-206ENST00000503121 A0A087X0B3 334 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 CLTAP09496 248 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 GAP43P17677 238 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 ME1P48163 572 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 CLCN4P51793 760 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 CLCNKBP51801 687 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 GTF2BQ00403 316 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 ELAVL2Q12926 359 aaKnown RBP13.13□□□□□ -0.31
SYNE4-206ENST00000503121 XKR4Q5GH76 650 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 HERC4Q5GLZ8 1057 aaPredicted RBP13.13□□□□□ -0.31
SYNE4-206ENST00000503121 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 ELMSAN1Q6PJG2 1045 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 PALB2Q86YC2 1186 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 SUSD6Q92537 303 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
SYNE4-206ENST00000503121 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
SYNE4-206ENST00000503121 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
SYNE4-206ENST00000503121 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 TTPALQ9BTX7 342 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 MRPL44Q9H9J2 332 aaKnown RBP13.13□□□□□ -0.31
SYNE4-206ENST00000503121 GOLGA2P5Q9HBQ8 144 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.13□□□□□ -0.31
SYNE4-206ENST00000503121 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 CNTN3Q9P232 1028 aa13.13□□□□□ -0.31
SYNE4-206ENST00000503121 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
SYNE4-206ENST00000503121 GLUD1P00367 558 aa13.12□□□□□ -0.31
SYNE4-206ENST00000503121 PIGRP01833 764 aa13.12□□□□□ -0.31
SYNE4-206ENST00000503121 WEE2P0C1S8 567 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms